RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 A8MXE2 369 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 KLRF2D3W0D1 207 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 TBX10O75333 385 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 ENTPD3O75355 529 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 MTA2O94776 668 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 RB1P06400 928 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 ARSBP15848 533 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 ZNF182P17025 639 aaPredicted RBP4.15□□□□□ -1.75
SQLE-204ENST00000520493 GABRB1P18505 474 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 AGAP20933 346 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 HOXD3P31249 432 aaPredicted RBP4.15□□□□□ -1.75
SQLE-204ENST00000520493 CLDN2P57739 230 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 CEBPZQ03701 1054 aaKnown RBP4.15□□□□□ -1.75
SQLE-204ENST00000520493 LTBQ06643 244 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 TFCP2Q12800 502 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 TNFAIP1Q13829 316 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 DCAF6Q58WW2 860 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 DNTTIP2Q5QJE6 756 aaKnown RBP4.15□□□□□ -1.75
SQLE-204ENST00000520493 GKAP1Q5VSY0 366 aaPredicted RBP4.15□□□□□ -1.75
SQLE-204ENST00000520493 PMS2CLQ68D20 193 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 CAPRIN2Q6IMN6 1127 aaKnown RBP4.15□□□□□ -1.75
SQLE-204ENST00000520493 IL27RAQ6UWB1 636 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 CTU1Q7Z7A3 348 aaKnown RBP4.15□□□□□ -1.75
SQLE-204ENST00000520493 ZSCAN30Q86W11 494 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 GPSM1Q86YR5 675 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 FAM217AQ8IXS0 508 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 KIAA2013Q8IYS2 634 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 AVL9Q8NBF6 648 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 PRPF31Q8WWY3 499 aaKnown RBP4.15□□□□□ -1.75
SQLE-204ENST00000520493 BBS4Q96RK4 519 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 FIZ1Q96SL8 496 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 MRPL9Q9BYD2 267 aaKnown RBP4.15□□□□□ -1.75
SQLE-204ENST00000520493 PLAC1Q9HBJ0 212 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 WDR6Q9NNW5 1121 aaKnown RBP4.15□□□□□ -1.75
SQLE-204ENST00000520493 ANKRD10Q9NXR5 420 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 SEC63Q9UGP8 760 aaKnown RBP4.15□□□□□ -1.75
SQLE-204ENST00000520493 CCL27Q9Y4X3 112 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 A0A0U1RQF3 1178 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 TYW5A2RUC4 315 aaKnown RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 HSPB6O14558 160 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 SPRY3O43610 288 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 HS6ST1O60243 411 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 SRPRAP08240 638 aaKnown RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 FGF3P11487 239 aaPredicted RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 SRD5A1P18405 259 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 CALRP27797 417 aaKnown RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 CHATP28329 748 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 HOXA11P31270 313 aaPredicted RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 ZNF41P51814 821 aaPredicted RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 MRPL12P52815 198 aaKnown RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 RAD23BP54727 409 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 DSC1Q08554 894 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 RUNX2Q13950 521 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 BAATQ14032 418 aaPredicted RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 PCLAFQ15004 111 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 ALG11Q2TAA5 492 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 ASTE1Q2TB18 679 aaPredicted RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 CCDC92Q53HC0 331 aaPredicted RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 CXorf66Q5JRM2 361 aaPredicted RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 ZNF324BQ6AW86 544 aaPredicted RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 C11orf88Q6PI97 169 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 LINGO2Q7L985 606 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 DNAAF5Q86Y56 855 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 EPHX4Q8IUS5 362 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 DENND6AQ8IWF6 608 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 DHX40Q8IX18 779 aaKnown RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 MCEMP1Q8IX19 187 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 RBFAQ8N0V3 343 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 CHCHD4Q8N4Q1 142 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 ZCCHC9Q8N567 271 aaKnown RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 ZNF713Q8N859 430 aaPredicted RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 SYT2Q8N9I0 419 aaPredicted RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 TMEM163Q8TC26 289 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 SLC22A18Q96BI1 424 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 FBXL8Q96CD0 374 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 PHF21BQ96EK2 531 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 SAT2Q96F10 170 aaPredicted RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 SIN3AQ96ST3 1273 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 FAM110AQ9BQ89 295 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 MXRA8Q9BRK3 442 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 OSGEPL1Q9H4B0 414 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 KIF9Q9HAQ2 790 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 RANGRFQ9HD47 186 aaPredicted RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 TAB2Q9NYJ8 693 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 FBXL17Q9UF56 701 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 NDRG3Q9UGV2 375 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 ACAD8Q9UKU7 415 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 EXO1Q9UQ84 846 aaKnown RBP4.14□□□□□ -1.75
SQLE-204ENST00000520493 EVPLQ92817 2033 aa4.14□□□□□ -1.75
SQLE-204ENST00000520493 H0Y626 953 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 AFPP02771 609 aaKnown RBP4.13□□□□□ -1.75
SQLE-204ENST00000520493 ACAA1P09110 424 aaPredicted RBP4.13□□□□□ -1.75
SQLE-204ENST00000520493 SELLP14151 372 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 TNFRSF8P28908 595 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 RFC1P35251 1148 aaPredicted RBP4.13□□□□□ -1.75
SQLE-204ENST00000520493 SLC15A1P46059 708 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 PPP5CP53041 499 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 PMS2P54278 862 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 F2RL1P55085 397 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 RRP1P56182 461 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms