RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 MCCC1Q96RQ3 725 aaPredicted RBP16.09■□□□□ 0.17
IGHV3-42-201ENST00000520410 TDRD1Q9BXT4 1180 aaKnown RBP16.09■□□□□ 0.17
IGHV3-42-201ENST00000520410 TEX101Q9BY14 249 aa16.09■□□□□ 0.17
IGHV3-42-201ENST00000520410 NHEJ1Q9H9Q4 299 aaPredicted RBP16.09■□□□□ 0.17
IGHV3-42-201ENST00000520410 SPATS2LQ9NUQ6 558 aaKnown RBP16.09■□□□□ 0.17
IGHV3-42-201ENST00000520410 AKAP7Q9P0M2 348 aaPredicted RBP16.09■□□□□ 0.17
IGHV3-42-201ENST00000520410 LOXL2Q9Y4K0 774 aa16.09■□□□□ 0.17
IGHV3-42-201ENST00000520410 APC2O95996 2303 aa16.09■□□□□ 0.17
IGHV3-42-201ENST00000520410 ZZEF1O43149 2961 aa16.09■□□□□ 0.17
IGHV3-42-201ENST00000520410 CHD6Q8TD26 2715 aa16.09■□□□□ 0.17
IGHV3-42-201ENST00000520410 DMXL2Q8TDJ6 3036 aa16.08■□□□□ 0.17
IGHV3-42-201ENST00000520410 TEX51A0A1B0GUA7 166 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 SSU72P8A0A1W2PR75 194 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 CAPN8A6NHC0 703 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 SPOPO43791 374 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 MFAP3LO75121 409 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 CLDN7O95471 211 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 ECEL1O95672 775 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 ITGA2BP08514 1039 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 CES1P23141 567 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 MAN1A1P33908 653 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 UGT1A5P35504 534 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 CTBSQ01459 385 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 EIF3IQ13347 325 aaKnown RBP16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 PEX6Q13608 980 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 GALNT3Q14435 633 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 HLTFQ14527 1009 aaKnown RBP eCLIP16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 PCSK7Q16549 785 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 GALNT13Q8IUC8 556 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 PQLC3Q8N755 202 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 CCHCR1Q8TD31 782 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 PTCD2Q8WV60 388 aaKnown RBP16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 MAML1Q92585 1016 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 RNF25Q96BH1 459 aaPredicted RBP16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 HDAC11Q96DB2 347 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 PRR11Q96HE9 360 aaPredicted RBP16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 RNF157Q96PX1 679 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 DNAJC7Q99615 494 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 RIOK2Q9BVS4 552 aaKnown RBP16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 FRMD8Q9BZ67 464 aaPredicted RBP16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 DPH1Q9BZG8 443 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 RDH14Q9HBH5 336 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 DTLQ9NZJ0 730 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 PKD2L2Q9NZM6 624 aa16.08■□□□□ 0.16
IGHV3-42-201ENST00000520410 ACACAQ13085 2346 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 TRBV23OR9-2A0A075B6M9 112 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 NUDT21O43809 227 aaKnown RBP16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 PYGLP06737 847 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 ITIH1P19827 911 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 HNRNPH3P31942 346 aaKnown RBP16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 ADCY8P40145 1251 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 OR1D5P58170 312 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 NIPAL4Q0D2K0 466 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 FAM182AQ5T1J6 154 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 OGFOD3Q6PK18 319 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 CCDC81Q6ZN84 652 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 VSTM4Q8IW00 320 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 RHOT2Q8IXI1 618 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 GPBAR1Q8TDU6 330 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 PATE1Q8WXA2 126 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 SPOCK2Q92563 424 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 AGAP2Q99490 1192 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 CHP1Q99653 195 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 MLPHQ9BV36 600 aaPredicted RBP16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 TRNAU1APQ9NX07 287 aaKnown RBP16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 AMACRQ9UHK6 382 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 ZNHIT2Q9UHR6 403 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 APPL1Q9UKG1 709 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 NENFQ9UMX5 172 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 PLEKHM1Q9Y4G2 1056 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 HYOU1Q9Y4L1 999 aa16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 ANKRD11Q6UB99 2663 aaPredicted RBP16.07■□□□□ 0.16
IGHV3-42-201ENST00000520410 PPP1R12AO14974 1030 aaPredicted RBP16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 FZD6O60353 706 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 FGF1P05230 155 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 SLC5A2P31639 672 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 NOP2P46087 812 aaKnown RBP16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 STC1P52823 247 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 PTSQ03393 145 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 DPTQ07507 201 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 SLC10A2Q12908 348 aaPredicted RBP16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 ALS2CLQ60I27 953 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 NPNTQ6UXI9 565 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 USP53Q70EK8 1073 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 B4GALNT4Q76KP1 1039 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 CHST15Q7LFX5 561 aaPredicted RBP16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 TECPR1Q7Z6L1 1165 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 PIM3Q86V86 326 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 NRROSQ86YC3 692 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 CNGA4Q8IV77 575 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 EXD1Q8NHP7 514 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 AHCYL2Q96HN2 611 aaKnown RBP16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 AGAP3Q96P47 875 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 TSGA13Q96PP4 275 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 CMKLR1Q99788 373 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 ADGRE3Q9BY15 652 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 SLC17A4Q9Y2C5 497 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 PRKAB1Q9Y478 270 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 CACNA1GO43497 2377 aa16.06■□□□□ 0.16
IGHV3-42-201ENST00000520410 CDRT15L2A8MXV6 281 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms