RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 FXYD1O00168 92 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 SCO1O75880 301 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 RBP1P09455 135 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 DBTP11182 482 aaKnown RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 YWHABP31946 246 aaKnown RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 C1QTNF8P60827 252 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 B2MP61769 119 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 DMP1Q13316 513 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 SNTA1Q13424 505 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 TOP3AQ13472 1001 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 ZNF404Q494X3 552 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 ESCO2Q56NI9 601 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 GJC2Q5T442 439 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 XYLT1Q86Y38 959 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 CDKL3Q8IVW4 592 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 SYTL1Q8IYJ3 562 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 PCDH19Q8TAB3 1148 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 STYXQ8WUJ0 223 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 RORBQ92753 470 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 LGALS12Q96DT0 336 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 CEP170P1Q96L14 293 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 MBOAT4Q96T53 435 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 HOPXQ9BPY8 73 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 MMP27Q9H306 513 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 TIGARQ9NQ88 270 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 FAM118AQ9NWS6 357 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 SEPT9Q9UHD8 586 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 INTS6Q9UL03 887 aaKnown RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 FIS1Q9Y3D6 152 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 HCN4Q9Y3Q4 1203 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 ZFC3H1O60293 1989 aaKnown RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 CAPN5O15484 640 aaPredicted RBP13.53□□□□□ -0.24
PABPC1-208ENST00000519004 ZNF780AO75290 641 aaPredicted RBP13.53□□□□□ -0.24
PABPC1-208ENST00000519004 ATG7O95352 703 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 CFBP00751 764 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 PGK2P07205 417 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 CCDC159P0C7I6 412 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 ICAM2P13598 275 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 CD6P30203 668 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 MAP2K4P45985 399 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 GLRBP48167 497 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 CSRP3P50461 194 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 SPP2Q13103 211 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 GPR50Q13585 617 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 CAPRIN1Q14444 709 aaKnown RBP13.53□□□□□ -0.24
PABPC1-208ENST00000519004 MFSD10Q14728 455 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 STK11Q15831 433 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 DALRD3Q5D0E6 543 aaKnown RBP13.53□□□□□ -0.24
PABPC1-208ENST00000519004 TOR2AQ5JU69 321 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 TSTD2Q5T7W7 516 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 TXNDC11Q6PKC3 985 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 TRMT1LQ7Z2T5 733 aaKnown RBP13.53□□□□□ -0.24
PABPC1-208ENST00000519004 PLD3Q8IV08 490 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 CCNYL1Q8N7R7 359 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 CCDC120Q96HB5 630 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 AGAP2Q99490 1192 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 C17orf62Q9BQA9 187 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 REXO4Q9GZR2 422 aaKnown RBP13.53□□□□□ -0.24
PABPC1-208ENST00000519004 OSBPL2Q9H1P3 480 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 MEAF6Q9HAF1 191 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 RAVER2Q9HCJ3 691 aaKnown RBP13.53□□□□□ -0.24
PABPC1-208ENST00000519004 ZFP14Q9HCL3 533 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 ADGRA2Q96PE1 1338 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 KRT87PA6NCN2 255 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 LEUTXA8MZ59 168 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 SLITRK5O94991 958 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 APOA1P02647 267 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 NCK1P16333 377 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 PIGAP37287 484 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 PGGT1BP53609 377 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 POU5F1BQ06416 359 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 PARP15Q460N3 678 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 TTC23Q5W5X9 447 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 PRMT9Q6P2P2 845 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 HORMAD1Q86X24 394 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 MINDY1Q8N5J2 469 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.53□□□□□ -0.24
PABPC1-208ENST00000519004 BPIFB1Q8TDL5 484 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 MARVELD3Q96A59 401 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 AURKBQ96GD4 344 aaPredicted RBP13.53□□□□□ -0.24
PABPC1-208ENST00000519004 RIT2Q99578 217 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 BDH2Q9BUT1 245 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 TRIM8Q9BZR9 551 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 AMBRA1Q9C0C7 1298 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 TNFRSF12AQ9NP84 129 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 FBXO28Q9NVF7 368 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 GPATCH2LQ9NWQ4 482 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 GTSE1Q9NYZ3 720 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 SNX6Q9UNH7 406 aa13.53□□□□□ -0.24
PABPC1-208ENST00000519004 PRKD3O94806 890 aa13.52□□□□□ -0.24
PABPC1-208ENST00000519004 CFL1P23528 166 aaKnown RBP13.52□□□□□ -0.24
PABPC1-208ENST00000519004 SLC6A2P23975 617 aa13.52□□□□□ -0.24
PABPC1-208ENST00000519004 UQCRC1P31930 480 aa13.52□□□□□ -0.24
PABPC1-208ENST00000519004 GTF2A2P52657 109 aa13.52□□□□□ -0.24
PABPC1-208ENST00000519004 TPD52P55327 224 aaPredicted RBP13.52□□□□□ -0.24
PABPC1-208ENST00000519004 DEFA1P59665 94 aa13.52□□□□□ -0.24
PABPC1-208ENST00000519004 DEFA3P59666 94 aa13.52□□□□□ -0.24
PABPC1-208ENST00000519004 UGCGQ16739 394 aa13.52□□□□□ -0.24
PABPC1-208ENST00000519004 BSPRYQ5W0U4 402 aa13.52□□□□□ -0.24
PABPC1-208ENST00000519004 OR5B17Q8NGF7 314 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms