RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 ACOX1Q15067 660 aa9.8□□□□□ -0.84
SH2D4A-202ENST00000518040 NR6A1Q15406 480 aa9.8□□□□□ -0.84
SH2D4A-202ENST00000518040 UGT8Q16880 541 aa9.8□□□□□ -0.84
SH2D4A-202ENST00000518040 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.8□□□□□ -0.84
SH2D4A-202ENST00000518040 FAM102AQ5T9C2 384 aaPredicted RBP9.8□□□□□ -0.84
SH2D4A-202ENST00000518040 DPPA4Q7L190 304 aa9.8□□□□□ -0.84
SH2D4A-202ENST00000518040 TMEM135Q86UB9 458 aa9.8□□□□□ -0.84
SH2D4A-202ENST00000518040 RASGRP3Q8IV61 690 aa9.8□□□□□ -0.84
SH2D4A-202ENST00000518040 SFRP1Q8N474 314 aa9.8□□□□□ -0.84
SH2D4A-202ENST00000518040 NUS1Q96E22 293 aa9.8□□□□□ -0.84
SH2D4A-202ENST00000518040 SUDS3Q9H7L9 328 aaPredicted RBP9.8□□□□□ -0.84
SH2D4A-202ENST00000518040 ACP6Q9NPH0 428 aa9.8□□□□□ -0.84
SH2D4A-202ENST00000518040 SLC17A4Q9Y2C5 497 aa9.8□□□□□ -0.84
SH2D4A-202ENST00000518040 ARHGAP10A1A4S6 786 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 ANKUB1A6NFN9 424 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 PSMA7O14818 248 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 BUB1BO60566 1050 aaPredicted RBP9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 KIAA0754O94854 1291 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 NDUFA10O95299 355 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 GNA14O95837 355 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 ADRA1BP35368 520 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 PPP1R2P41236 205 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 GABRB2P47870 512 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 CCL11P51671 97 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 PMS1P54277 932 aaKnown RBP9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 CDK3Q00526 305 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 PARP15Q460N3 678 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 SYVN1Q86TM6 617 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 MCEMP1Q8IX19 187 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 IQCKQ8N0W5 287 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 LZTR1Q8N653 840 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 PAF1Q8N7H5 531 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 Q8NA96 180 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 MSANTD4Q8NCY6 345 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 SLC37A2Q8TED4 501 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 C18orf8Q96DM3 657 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 SCARF2Q96GP6 870 aaPredicted RBP9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 GSDMAQ96QA5 445 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 OR2M4Q96R27 311 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 ING2Q9H160 280 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 LHX9Q9NQ69 397 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 LHX3Q9UBR4 397 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 UBA2Q9UBT2 640 aaPredicted RBP9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 ZFHX3Q15911 3703 aa9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 SETD2Q9BYW2 2564 aaPredicted RBP9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 MN1Q10571 1320 aaPredicted RBP9.79□□□□□ -0.84
SH2D4A-202ENST00000518040 A0A1W2PQ67 120 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 TRIM49BA6NDI0 452 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 CEACAM4O75871 244 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 LRIG2O94898 1065 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 FUCA1P04066 466 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 PRF1P14222 555 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 ZNF28P17035 718 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 ITGA3P26006 1051 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 MARSP56192 900 aaKnown RBP9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 PRR30Q53SZ7 412 aaPredicted RBP9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 FOXD4L5Q5VV16 416 aaPredicted RBP9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 SLC6A19Q695T7 634 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 SLC9B2Q86UD5 537 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 CAMK1DQ8IU85 385 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 TMEM35BQ8NCS4 154 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 FOXD4L4Q8WXT5 416 aaPredicted RBP9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 ECHDC3Q96DC8 303 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 EXOC2Q96KP1 924 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 COQ10AQ96MF6 247 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 ACTL8Q9H568 366 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 LNPEPQ9UIQ6 1025 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 ST14Q9Y5Y6 855 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 TNRC6AQ8NDV7 1962 aaKnown RBP9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 APCP25054 2843 aa9.78□□□□□ -0.84
SH2D4A-202ENST00000518040 SSU72P8A0A1W2PR75 194 aa9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 BECN2A8MW95 431 aa9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 FGF5P12034 268 aa9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 GM2AP17900 193 aa9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 FLT3P36888 993 aa9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 ITGA1P56199 1179 aa9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 RPS15P62841 145 aaKnown RBP9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 BCL2L1Q07817 233 aa9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 CYTH1Q15438 398 aa9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 SP5Q6BEB4 398 aaPredicted RBP9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 ZSWIM9Q86XI8 627 aa9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 ZNF761Q86XN6 746 aaPredicted RBP9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 RTL3Q8N8U3 475 aaKnown RBP9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 SHC3Q92529 594 aa9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 SNRNP40Q96DI7 357 aaKnown RBP9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 DHTKD1Q96HY7 919 aaPredicted RBP9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 CFAP57Q96MR6 1250 aa9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 FCRL4Q96PJ5 515 aa9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 OR6C1Q96RD1 312 aa9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 UNKQ9C0B0 810 aaKnown RBP9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 BRD8Q9H0E9 1235 aa9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 KLHL3Q9UH77 587 aa9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.77□□□□□ -0.84
SH2D4A-202ENST00000518040 PRRC2CQ9Y520 2896 aaKnown RBP9.77□□□□□ -0.85
SH2D4A-202ENST00000518040 ADGRG4Q8IZF6 3080 aa9.77□□□□□ -0.85
SH2D4A-202ENST00000518040 ARGFXA6NJG6 315 aa9.77□□□□□ -0.85
SH2D4A-202ENST00000518040 OR5K4A6NMS3 321 aa9.77□□□□□ -0.85
SH2D4A-202ENST00000518040 K7ELQ4 463 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms