RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 LINC00597Q9H2U6 94 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 NSUN3Q9H649 340 aaKnown RBP11.76□□□□□ -0.53
SPIDR-203ENST00000517693 ZDHHC6Q9H6R6 413 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 ZNF358Q9NW07 568 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 ZFP69BQ9UJL9 534 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 TMCO1Q9UM00 188 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 SLC12A4Q9UP95 1085 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 SORCS3Q9UPU3 1222 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 CFAP73A6NFT4 308 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 NPHS1O60500 1241 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 DNAJC6O75061 913 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 SMIM24O75264 130 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 PKMP14618 531 aaKnown RBP11.76□□□□□ -0.53
SPIDR-203ENST00000517693 PBX2P40425 430 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 CTSOP43234 321 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-203ENST00000517693 MKI67P46013 3256 aaKnown RBP11.76□□□□□ -0.53
SPIDR-203ENST00000517693 ATP6V0D1P61421 351 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 ACTN3Q08043 901 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-203ENST00000517693 RCN2Q14257 317 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 CBX2Q14781 532 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-203ENST00000517693 ZNF789Q5FWF6 425 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 TECRLQ5HYJ1 363 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 CFAP157Q5JU67 520 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 GDPD4Q6W3E5 623 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 ZCCHC23Q6ZST2 131 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 SNX20Q7Z614 316 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 RBFAQ8N0V3 343 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 OR6Y1Q8NGX8 325 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 OR6K2Q8NGY2 324 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 RHEBL1Q8TAI7 183 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 HEXDCQ8WVB3 486 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 STON2Q8WXE9 905 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 PPM1EQ8WY54 764 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 KCNJ9Q92806 393 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 ERP27Q96DN0 273 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 MCCC1Q96RQ3 725 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-203ENST00000517693 ILKAPQ9H0C8 392 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-203ENST00000517693 CERS4Q9HA82 394 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 EML4Q9HC35 981 aaKnown RBP11.76□□□□□ -0.53
SPIDR-203ENST00000517693 SAR1AQ9NR31 198 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 IGSF5Q9NSI5 407 aa11.76□□□□□ -0.53
SPIDR-203ENST00000517693 CPSF2Q9P2I0 782 aaKnown RBP11.76□□□□□ -0.53
SPIDR-203ENST00000517693 APOBEC2Q9Y235 224 aaKnown RBP11.76□□□□□ -0.53
SPIDR-203ENST00000517693 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-203ENST00000517693 SYCE1LA8MT33 242 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 E5RI56 91 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 PRMT5O14744 637 aaPredicted RBP11.75□□□□□ -0.53
SPIDR-203ENST00000517693 DNAJC8O75937 253 aaPredicted RBP11.75□□□□□ -0.53
SPIDR-203ENST00000517693 UBOX5O94941 541 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 WISP3O95389 354 aaPredicted RBP11.75□□□□□ -0.53
SPIDR-203ENST00000517693 PRAMEF1O95521 474 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 F7P08709 466 aaPredicted RBP11.75□□□□□ -0.53
SPIDR-203ENST00000517693 ZNF37AP17032 561 aaPredicted RBP11.75□□□□□ -0.53
SPIDR-203ENST00000517693 CTPS1P17812 591 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 RPS3P23396 243 aaKnown RBP eCLIP11.75□□□□□ -0.53
SPIDR-203ENST00000517693 SCTRP47872 440 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 GLRBP48167 497 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 SF3A3Q12874 501 aaKnown RBP eCLIP11.75□□□□□ -0.539e-19■■■■■ 36
SPIDR-203ENST00000517693 PRKAA1Q13131 559 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 ZNF460Q14592 562 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 PTPRCAPQ14761 206 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 GALNTL6Q49A17 601 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 FAM78AQ5JUQ0 283 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 DPY19L3Q6ZPD9 716 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 NUDT18Q6ZVK8 323 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 GET4Q7L5D6 327 aaPredicted RBP11.75□□□□□ -0.53
SPIDR-203ENST00000517693 TAS2R42Q7RTR8 314 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 RAB44Q7Z6P3 723 aaPredicted RBP11.75□□□□□ -0.53
SPIDR-203ENST00000517693 CPA6Q8N4T0 437 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 FITM2Q8N6M3 262 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 C12orf76Q8N812 135 aaPredicted RBP11.75□□□□□ -0.53
SPIDR-203ENST00000517693 UCMAQ8WVF2 138 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 FGF13Q92913 245 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 ULK4Q96C45 1275 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 GPR78Q96P69 363 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 TRMOQ9BU70 441 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 CIPCQ9C0C6 399 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 DERL2Q9GZP9 239 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 DRC3Q9H069 523 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 CDH19Q9H159 772 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 ZFP14Q9HCL3 533 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 MRGBPQ9NV56 204 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 DNAJC28Q9NX36 388 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 VTI1BQ9UEU0 232 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 TRMT6Q9UJA5 497 aaKnown RBP11.75□□□□□ -0.53
SPIDR-203ENST00000517693 GNPTGQ9UJJ9 305 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 PLA2G4CQ9UP65 541 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 DNAJC16Q9Y2G8 782 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 RAP2CQ9Y3L5 183 aa11.75□□□□□ -0.53
SPIDR-203ENST00000517693 GLYATL1P3A0A0U1RQE8 302 aa11.74□□□□□ -0.53
SPIDR-203ENST00000517693 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.74□□□□□ -0.53
SPIDR-203ENST00000517693 TARM1B6A8C7 271 aa11.74□□□□□ -0.53
SPIDR-203ENST00000517693 MYO1CO00159 1063 aa11.74□□□□□ -0.53
SPIDR-203ENST00000517693 BNIP3LO60238 219 aa11.74□□□□□ -0.53
SPIDR-203ENST00000517693 ALPIP09923 528 aa11.74□□□□□ -0.53
SPIDR-203ENST00000517693 TPBGLP0DKB5 382 aa11.74□□□□□ -0.53
SPIDR-203ENST00000517693 HNF1BP35680 557 aa11.74□□□□□ -0.53
SPIDR-203ENST00000517693 CDKN2DP55273 166 aa11.74□□□□□ -0.53
SPIDR-203ENST00000517693 NFKB2Q00653 900 aa11.74□□□□□ -0.53
SPIDR-203ENST00000517693 PFKPQ01813 784 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms