RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 OAS2P29728 719 aaKnown RBP-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 ALDH1B1P30837 517 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 SEC61BP60468 96 aaKnown RBP-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 PFN3P60673 137 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 FCHO2Q0JRZ9 810 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 RAB32Q13637 225 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 C16orf72Q14CZ0 275 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 DHCR24Q15392 516 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 ATAT1Q5SQI0 421 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 PLAG1Q6DJT9 500 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 RGMBQ6NW40 437 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 KSR2Q6VAB6 950 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 B3GNT6Q6ZMB0 384 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 WDR5BQ86VZ2 330 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 MICU3Q86XE3 530 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 CALHM3Q86XJ0 350 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 AMOTL1Q8IY63 956 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 ADSSL1Q8N142 457 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 OR2T11Q8NH01 316 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 FLVCR1-AS1Q8TAF5 88 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 ARSGQ96EG1 525 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 FAM227BQ96M60 508 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 GMLQ99445 158 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 DGCR6LQ9BY27 220 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 ADNPQ9H2P0 1102 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 CERS4Q9HA82 394 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 A1CFQ9NQ94 594 aaKnown RBP-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 SERINC1Q9NRX5 453 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 POLG2Q9UHN1 485 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 PKP3Q9Y446 797 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 CD2APQ9Y5K6 639 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 ZNF407Q9C0G0 2248 aa-0.96□□□□□ -2.56
RNU6-539P-201ENST00000516665 SDK2Q58EX2 2172 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 AKR1B15C9JRZ8 316 aaPredicted RBP-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 ZNF197O14709 1029 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 ZNHIT1O43257 154 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 PCDHGA12O60330 932 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 ZNF217O75362 1048 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 LARGE1O95461 756 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 PSG2P11465 335 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 MASP1P48740 699 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 LMAN1P49257 510 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 TMEM50BP56557 158 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 WNT4P56705 351 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 KIAA0141Q14154 515 aaPredicted RBP-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 SLC29A2Q14542 456 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 ACAP2Q15057 778 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 TEAD2Q15562 447 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 CCDC27Q2M243 656 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 PPP6R3Q5H9R7 873 aaPredicted RBP-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 WLSQ5T9L3 541 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 WDR93Q6P2C0 686 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 MZT2AQ6P582 158 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 SLC16A9Q7RTY1 509 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 PIWIL4Q7Z3Z4 852 aaKnown RBP-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 TMEM200AQ86VY9 491 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 DGKHQ86XP1 1220 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 OR10G8Q8NGN5 311 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 IL31RAQ8NI17 732 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 AGAP11Q8TF27 550 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 ATP8B4Q8TF62 1192 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 ATOH1Q92858 354 aaPredicted RBP-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 CEP295NLQ96MC4 621 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 NT5C1BQ96P26 610 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 TTC1Q99614 292 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 ARID3AQ99856 593 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 HOXD1Q9GZZ0 328 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 TUBB1Q9H4B7 451 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 ARMT1Q9H993 441 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 C17orf75Q9HAS0 396 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 ZBTB20Q9HC78 741 aaPredicted RBP-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 SPHK2Q9NRA0 654 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 PIH1D1Q9NWS0 290 aaKnown RBP-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 CAMSAP3Q9P1Y5 1249 aaPredicted RBP-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 STAP2Q9UGK3 403 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 OSGIN2Q9Y236 505 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 PCDHGA9Q9Y5G4 932 aaKnown RBP-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 PCDHGA8Q9Y5G5 932 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 PCDHGA7Q9Y5G6 932 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 PCDHGA6Q9Y5G7 932 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 PCDHGA3Q9Y5H0 932 aa-0.97□□□□□ -2.56
RNU6-539P-201ENST00000516665 C5orf60A6NFR6 353 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 SNAI2O43623 268 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 FAM155BO75949 473 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 PIGNO95427 931 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 TGDSO95455 350 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 GIFP27352 417 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 CLCNKAP51800 687 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 SRSF5Q13243 272 aaKnown RBP-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 CBFBQ13951 182 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 TAZQ16635 292 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 NCAPH2Q6IBW4 605 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 ZNF544Q6NX49 715 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 KRTAP19-3Q7Z4W3 81 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 ANKS1BQ7Z6G8 1248 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 RAB42Q8N4Z0 105 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 MYCT1Q8N699 235 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 OR2AK2Q8NG84 335 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 OR6B3Q8NGW1 331 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 C11orf45Q8TAV5 145 aa-0.98□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms