RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 TSPAN14Q8NG11 270 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 CAGE1Q8TC20 777 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 KRT35Q92764 455 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 MAP4K1Q92918 833 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 ZNF419Q96HQ0 510 aaPredicted RBP4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 CABS1Q96KC9 395 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 CCDC114Q96M63 670 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 TIMP4Q99727 224 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 PI4K2AQ9BTU6 479 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 EFHD1Q9BUP0 239 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 ABHD6Q9BV23 337 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 LHPPQ9H008 270 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 SPATC1LQ9H0A9 340 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 KCNN2Q9H2S1 579 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 KCNK15Q9H427 330 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 NRIP3Q9NQ35 241 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 HACL1Q9UJ83 578 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 FBXW11Q9UKB1 542 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 RAP2CQ9Y3L5 183 aa4.31□□□□□ -1.72
RNU6-488P-201ENST00000515918 FNDC1Q4ZHG4 1894 aaPredicted RBP4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 ARHGEF37A1IGU5 675 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 AKR1B15C9JRZ8 316 aaPredicted RBP4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 SMIM22K7EJ46 135 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 K7ESM1 405 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 SMAD9O15198 467 aaKnown RBP4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 PRPF4O43172 522 aaKnown RBP eCLIP4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 UGDHO60701 494 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 CREG1O75629 220 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 SLC22A3O75751 556 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 RGS11O94810 467 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 SIX3O95343 332 aaPredicted RBP4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 ZFYP08048 801 aaPredicted RBP4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 SUPT20HL2P0C7V6 817 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 TFPIP10646 304 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 TNFRSF8P28908 595 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 TNFSF8P32971 234 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 RFC1P35251 1148 aaPredicted RBP4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 PRKCIP41743 596 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 PRCPP42785 496 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 CAPZA1P52907 286 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 CTSWP56202 376 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 FAM27E3Q08E93 113 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 WASHC5Q12768 1159 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 COASYQ13057 564 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 ITGADQ13349 1161 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 MEP1BQ16820 701 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 SUPT20HL1Q3ZLR7 823 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 ALG10Q5BKT4 473 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 ALG10BQ5I7T1 473 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 ASPHD1Q5U4P2 390 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 TMEM71Q6P5X7 295 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 MTSS1LQ765P7 747 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 SPATA19Q7Z5L4 167 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 GRASPQ7Z6J2 395 aaPredicted RBP4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 CENPVQ7Z7K6 275 aaPredicted RBP4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 AMIGO2Q86SJ2 522 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 SDCCAG8Q86SQ7 713 aaPredicted RBP4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 DDIASQ8IXT1 998 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 ZNF595Q8IYB9 648 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 ADGRF4Q8IZF3 695 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 HORMAD2Q8N7B1 307 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 IQUBQ8NA54 791 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 PNLDC1Q8NA58 520 aaKnown RBP4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 KDM1BQ8NB78 822 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 SPC24Q8NBT2 197 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 BCAS4Q8TDM0 211 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 TAS1R2Q8TE23 839 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 DVL3Q92997 716 aaPredicted RBP4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 CLMNQ96JQ2 1002 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 HARBI1Q96MB7 349 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 CRAMP1Q96RY5 1269 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 PCGF1Q9BSM1 259 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 RTN4RQ9BZR6 473 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 ESRP2Q9H6T0 727 aaKnown RBP4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 DNAJC18Q9H819 358 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 ANKZF1Q9H8Y5 726 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 CNOT10Q9H9A5 744 aaKnown RBP4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 CYP4F11Q9HBI6 524 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 MKKSQ9NPJ1 570 aaPredicted RBP4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 PNRC2Q9NPJ4 139 aaKnown RBP4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 SMPD4Q9NXE4 827 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 LARSQ9P2J5 1176 aaKnown RBP4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 ERVK-11Q9UQG0 969 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 KCNK7Q9Y2U2 307 aa4.3□□□□□ -1.72
RNU6-488P-201ENST00000515918 IGSF1Q8N6C5 1336 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 CPED1A4D0V7 1026 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 DPPA5A6NC42 116 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 ENO4A6NNW6 628 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 CCDC188H7C350 402 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 PAX4O43316 350 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 KINO60870 393 aaKnown RBP4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 TOMM70O94826 608 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 CYC1P08574 325 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 OR52Z1P0C646 297 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 STMN1P16949 149 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 ZNF20P17024 532 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 WT1P19544 449 aaPredicted RBP4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 AMPHP49418 695 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 ARSEP51690 589 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 BMXP51813 675 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms