RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.28□□□□□ -1.88
HERC4-215ENST00000515753 MOB3CQ70IA8 216 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 TADA2BQ86TJ2 420 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 DIS3L2Q8IYB7 885 aaKnown RBP3.28□□□□□ -1.88
HERC4-215ENST00000515753 ZNF114Q8NC26 417 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 GJC3Q8NFK1 279 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 NFKBIDQ8NI38 313 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 ARRDC2Q8TBH0 407 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 ZMAT2Q96NC0 199 aaKnown RBP3.28□□□□□ -1.88
HERC4-215ENST00000515753 SLF1Q9BQI6 1058 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 SLC32A1Q9H598 525 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 GAREM1Q9H706 876 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 EIF2B3Q9NR50 452 aaKnown RBP3.28□□□□□ -1.88
HERC4-215ENST00000515753 SNTG1Q9NSN8 517 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 DIAPH3Q9NSV4 1193 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 C20orf141Q9NUB4 165 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 TAS2R10Q9NYW0 307 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 IL1RAPL1Q9NZN1 696 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 MPP6Q9NZW5 540 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 HSPB7Q9UBY9 170 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 PAM16Q9Y3D7 125 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 NFE2L3Q9Y4A8 694 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 SNX8Q9Y5X2 465 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 HECW2Q9P2P5 1572 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 KIF13AQ9H1H9 1805 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 FHOD3Q2V2M9 1422 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 KIAA0556O60303 1618 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 A0A1W2PQM1 296 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 BICDL2A1A5D9 508 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 TYW5A2RUC4 315 aaKnown RBP3.27□□□□□ -1.89
HERC4-215ENST00000515753 SMTNL1A8MU46 457 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 J3KR12 359 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 CCNDBP1O95273 360 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 MLYCDO95822 493 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 TFPIP10646 304 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 AGAP20933 346 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 TCEA1P23193 301 aaKnown RBP3.27□□□□□ -1.89
HERC4-215ENST00000515753 CDH15P55291 814 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 RPP30P78346 268 aaKnown RBP3.27□□□□□ -1.89
HERC4-215ENST00000515753 ZBED6P86452 979 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 ILF3Q12906 894 aaKnown RBP eCLIP3.27□□□□□ -1.89
HERC4-215ENST00000515753 NFIL3Q16649 462 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 SOWAHAQ2M3V2 549 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 KIF19Q2TAC6 998 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 KRTAP24-1Q3LI83 254 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 PLEKHA7Q6IQ23 1121 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 H1FNTQ75WM6 255 aaPredicted RBP3.27□□□□□ -1.89
HERC4-215ENST00000515753 RRM2BQ7LG56 351 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 SHFQ7M4L6 423 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 ARMC9Q7Z3E5 817 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 PXKQ7Z7A4 578 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 CPLX4Q7Z7G2 160 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 PRPF39Q86UA1 669 aaKnown RBP3.27□□□□□ -1.89
HERC4-215ENST00000515753 PARP16Q8N5Y8 322 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 TMED6Q8WW62 240 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 FBXL8Q96CD0 374 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 APOPT1Q96IL0 206 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 FEM1CQ96JP0 617 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 ZNF385AQ96PM9 386 aaKnown RBP3.27□□□□□ -1.89
HERC4-215ENST00000515753 DUX5Q96PT3 197 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 MXRA8Q9BRK3 442 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 TXLNGYQ9BZA5 131 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 MUC13Q9H3R2 512 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 BRF2Q9HAW0 419 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 BABAM1Q9NWV8 329 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 GIMAP2Q9UG22 337 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 TMEM5Q9Y2B1 443 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 FANCAO15360 1455 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 YEATS2Q9ULM3 1422 aa3.27□□□□□ -1.89
HERC4-215ENST00000515753 MAP3K4Q9Y6R4 1608 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 ABCA8O94911 1581 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 RPGRIP1LQ68CZ1 1315 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 AP3D1O14617 1153 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 TSPAN4O14817 238 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 HSPA12AO43301 675 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 ATP2C2O75185 946 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 MTA2O94776 668 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 ZBTB11O95625 1053 aaPredicted RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 MT-CYBP00156 380 aaPredicted RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 GALTP07902 379 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 HSP90AB1P08238 724 aaKnown RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 MMP2P08253 660 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 IRF1P10914 325 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 COX7A2P14406 83 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 PORP16435 677 aaPredicted RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 DDX5P17844 614 aaKnown RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 IL11P20809 199 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 POU1F1P28069 291 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 EPHA8P29322 1005 aaPredicted RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 HNRNPH1P31943 449 aaKnown RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 CTNNA1P35221 906 aaKnown RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 RARSP54136 660 aaKnown RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 EEF1A2Q05639 463 aaKnown RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 EPS8Q12929 822 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 PTP4A2Q12974 167 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 COASYQ13057 564 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 CHAF1BQ13112 559 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 SNTA1Q13424 505 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 RUNX2Q13950 521 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms