RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 PPIDQ08752 370 aaKnown RBP17.43■□□□□ 0.38
DDX41-217ENST00000515562 PTPRRQ15256 657 aa17.43■□□□□ 0.38
DDX41-217ENST00000515562 SPRED1Q7Z699 444 aa17.43■□□□□ 0.38
DDX41-217ENST00000515562 B3GNT8Q7Z7M8 397 aa17.43■□□□□ 0.38
DDX41-217ENST00000515562 NRSN1Q8IZ57 195 aa17.43■□□□□ 0.38
DDX41-217ENST00000515562 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.43■□□□□ 0.38
DDX41-217ENST00000515562 SLC35G2Q8TBE7 412 aa17.43■□□□□ 0.38
DDX41-217ENST00000515562 ARRDC2Q8TBH0 407 aa17.43■□□□□ 0.38
DDX41-217ENST00000515562 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.43■□□□□ 0.38
DDX41-217ENST00000515562 RAPGEF5Q92565 580 aa17.43■□□□□ 0.38
DDX41-217ENST00000515562 RNF157Q96PX1 679 aa17.43■□□□□ 0.38
DDX41-217ENST00000515562 FOXP3Q9BZS1 431 aa17.43■□□□□ 0.38
DDX41-217ENST00000515562 TSPY26PQ9H489 355 aa17.43■□□□□ 0.38
DDX41-217ENST00000515562 SUDS3Q9H7L9 328 aaPredicted RBP17.43■□□□□ 0.38
DDX41-217ENST00000515562 SUFUQ9UMX1 484 aa17.43■□□□□ 0.38
DDX41-217ENST00000515562 CHKBQ9Y259 395 aa17.43■□□□□ 0.38
DDX41-217ENST00000515562 RNF215Q9Y6U7 377 aa17.43■□□□□ 0.38
DDX41-217ENST00000515562 KLK10O43240 276 aa17.42■□□□□ 0.38
DDX41-217ENST00000515562 ZW10O43264 779 aa17.42■□□□□ 0.38
DDX41-217ENST00000515562 MTA2O94776 668 aa17.42■□□□□ 0.38
DDX41-217ENST00000515562 PTSQ03393 145 aa17.42■□□□□ 0.38
DDX41-217ENST00000515562 RAB11FIP2Q7L804 512 aa17.42■□□□□ 0.38
DDX41-217ENST00000515562 NLRP8Q86W28 1048 aa17.42■□□□□ 0.38
DDX41-217ENST00000515562 CNGA4Q8IV77 575 aa17.42■□□□□ 0.38
DDX41-217ENST00000515562 Q8N9G6 341 aaPredicted RBP17.42■□□□□ 0.38
DDX41-217ENST00000515562 LPCAT1Q8NF37 534 aa17.42■□□□□ 0.38
DDX41-217ENST00000515562 ZDHHC1Q8WTX9 485 aa17.42■□□□□ 0.38
DDX41-217ENST00000515562 TMEM159Q96B96 161 aa17.42■□□□□ 0.38
DDX41-217ENST00000515562 LYSMD1Q96S90 227 aa17.42■□□□□ 0.38
DDX41-217ENST00000515562 ABCG8Q9H221 673 aa17.42■□□□□ 0.38
DDX41-217ENST00000515562 NHEJ1Q9H9Q4 299 aaPredicted RBP17.42■□□□□ 0.38
DDX41-217ENST00000515562 PCDH9Q9HC56 1237 aa17.42■□□□□ 0.38
DDX41-217ENST00000515562 TAAR2Q9P1P5 351 aa17.42■□□□□ 0.38
DDX41-217ENST00000515562 CD84Q9UIB8 345 aa17.42■□□□□ 0.38
DDX41-217ENST00000515562 SMG1Q96Q15 3661 aaKnown RBP17.42■□□□□ 0.38
DDX41-217ENST00000515562 BPTFQ12830 3046 aa17.42■□□□□ 0.38
DDX41-217ENST00000515562 PMS2P1A4D2B8 440 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 TK2O00142 265 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 ATXN7O15265 892 aaPredicted RBP17.41■□□□□ 0.38
DDX41-217ENST00000515562 PRLP01236 227 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 IFI35P80217 286 aaPredicted RBP17.41■□□□□ 0.38
DDX41-217ENST00000515562 NIPAL4Q0D2K0 466 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 SLC10A2Q12908 348 aaPredicted RBP17.41■□□□□ 0.38
DDX41-217ENST00000515562 IHHQ14623 411 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 ODF2Q5BJF6 829 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 LRRC38Q5VT99 294 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 DOK6Q6PKX4 331 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 SLC30A9Q6PML9 568 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 C17orf82Q86X59 251 aaPredicted RBP17.41■□□□□ 0.38
DDX41-217ENST00000515562 NRROSQ86YC3 692 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 SFTPA2Q8IWL1 248 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 FBXO39Q8N4B4 442 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 PLD5Q8N7P1 536 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 LSM14AQ8ND56 463 aaKnown RBP17.41■□□□□ 0.38
DDX41-217ENST00000515562 SCAMP4Q969E2 229 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 SCARF2Q96GP6 870 aaPredicted RBP17.41■□□□□ 0.38
DDX41-217ENST00000515562 OR2M4Q96R27 311 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 CHP1Q99653 195 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 ADGRE3Q9BY15 652 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 SPATS2LQ9NUQ6 558 aaKnown RBP17.41■□□□□ 0.38
DDX41-217ENST00000515562 SPTLC3Q9NUV7 552 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 PCDHGA7Q9Y5G6 932 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 HEY1Q9Y5J3 304 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 KIF26BQ2KJY2 2108 aa17.41■□□□□ 0.38
DDX41-217ENST00000515562 A0A0U1RQS6 177 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 RHPN2P1A8MT19 583 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 KCNK1O00180 336 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 APOL1O14791 398 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 JCHAINP01591 159 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 FUCA1P04066 466 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 FGF1P05230 155 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 JMJD7P0C870 316 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 ZFXP17010 805 aaPredicted RBP17.4■□□□□ 0.38
DDX41-217ENST00000515562 UGT1A5P35504 534 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 ADCY8P40145 1251 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 SLC1A1P43005 524 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 POLD2P49005 469 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 MAZP56270 477 aaKnown RBP17.4■□□□□ 0.38
DDX41-217ENST00000515562 CTBSQ01459 385 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 BIRC2Q13490 618 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 LRP8Q14114 963 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 NR1D2Q14995 579 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 CLPPQ16740 277 aaPredicted RBP17.4■□□□□ 0.38
DDX41-217ENST00000515562 MAP9Q49MG5 647 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 SLC9A4Q6AI14 798 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 RFLNAQ6ZTI6 216 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 ZNF438Q7Z4V0 828 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 EXD1Q8NHP7 514 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 LRRN4Q8WUT4 740 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 SMIM14Q96QK8 99 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 MAK16Q9BXY0 300 aaKnown RBP17.4■□□□□ 0.38
DDX41-217ENST00000515562 INTUQ9ULD6 942 aa17.4■□□□□ 0.38
DDX41-217ENST00000515562 ARHGEF17Q96PE2 2063 aaPredicted RBP17.4■□□□□ 0.38
DDX41-217ENST00000515562 C1orf232A0A0U1RR37 186 aa17.39■□□□□ 0.37
DDX41-217ENST00000515562 C3orf70A6NLC5 250 aaPredicted RBP17.39■□□□□ 0.37
DDX41-217ENST00000515562 PPP1R12AO14974 1030 aaPredicted RBP17.39■□□□□ 0.37
DDX41-217ENST00000515562 KRT1P04264 644 aa17.39■□□□□ 0.37
DDX41-217ENST00000515562 AK4P27144 223 aaPredicted RBP17.39■□□□□ 0.37
DDX41-217ENST00000515562 ACTR1BP42025 376 aa17.39■□□□□ 0.37
DDX41-217ENST00000515562 CD86P42081 329 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms