RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 SCINQ9Y6U3 715 aa14.98□□□□□ -0.01
DDR1-278ENST00000515233 LRRC53A6NM62 1247 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 FZD6O60353 706 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 SOD1P00441 154 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 THRAP10827 490 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 IL1R2P27930 398 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 CSTF2P33240 577 aaKnown RBP eCLIP14.97□□□□□ -0.01
DDR1-278ENST00000515233 UGT1A3P35503 534 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 PRKCIP41743 596 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 GPR1P46091 355 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 FASLGP48023 281 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 ATP1A2P50993 1020 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 CDH6P55285 790 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 GPLD1P80108 840 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 NFKB2Q00653 900 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 CLCA4Q14CN2 919 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 STX1AQ16623 288 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 ARMC12Q5T9G4 340 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 TMEM71Q6P5X7 295 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 USP45Q70EL2 814 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 ZNF571Q7Z3V5 609 aaPredicted RBP14.97□□□□□ -0.01
DDR1-278ENST00000515233 NDUFAF2Q8N183 169 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 CCDC112Q8NEF3 446 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 NSMCE1Q8WV22 266 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 PIH1D2Q8WWB5 315 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 ASPSCR1Q9BZE9 553 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 TRIM4Q9C037 500 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 B3GALT1Q9Y5Z6 326 aa14.97□□□□□ -0.01
DDR1-278ENST00000515233 B4E171 279 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 DDX3XO00571 662 aaKnown RBP eCLIP14.96□□□□□ -0.014e-8■■■■■ 37
DDR1-278ENST00000515233 PDHA1P08559 390 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 ZNF30P17039 623 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 TSPAN7P41732 249 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 ACTR1BP42025 376 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 MMP13P45452 471 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 ACTR1AP61163 376 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 MAXP61244 160 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 PTSQ03393 145 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 PTPRRQ15256 657 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 PYCR3Q53H96 274 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 NKAIN2Q5VXU1 208 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 ADAMTSL4Q6UY14 1074 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 ZNF765Q7L2R6 523 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 TSPAN33Q86UF1 283 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 LRRC49Q8IUZ0 686 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 RAVER1Q8IY67 606 aaKnown RBP14.96□□□□□ -0.01
DDR1-278ENST00000515233 TEX26Q8N6G2 289 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 IL22RA1Q8N6P7 574 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 JPH3Q8WXH2 748 aaPredicted RBP14.96□□□□□ -0.01
DDR1-278ENST00000515233 ART4Q93070 314 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 PMEPA1Q969W9 287 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 TRIM11Q96F44 468 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 CSPG4P5Q96PW8 444 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 OR2M4Q96R27 311 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 ISCUQ9H1K1 167 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 ABCG8Q9H221 673 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 RTN4Q9NQC3 1192 aaKnown RBP14.96□□□□□ -0.01
DDR1-278ENST00000515233 KCNK4Q9NYG8 393 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 PLEKHM1Q9Y4G2 1056 aa14.96□□□□□ -0.01
DDR1-278ENST00000515233 GOLGA6CA6NDK9 693 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 GOLGA6BA6NDN3 693 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 PYGLP06737 847 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 GOLGA6DP0CG33 693 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 MYBL1P10243 752 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 RARAP10276 462 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 CSF2RBP32927 897 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 SERPINB6P35237 376 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 RAB15P59190 212 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 LRP8Q14114 963 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 ASIC2Q16515 512 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 BORAQ6PGQ7 559 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 SFRP1Q8N474 314 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 ATPAF2Q8N5M1 289 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 BMPERQ8N8U9 685 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 ZNF653Q96CK0 615 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 AP2M1Q96CW1 435 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 SPRY4Q9C004 299 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 OCIAD1Q9NX40 245 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 SLC39A1Q9NY26 324 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 GOLGA6AQ9NYA3 693 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 TUBD1Q9UJT1 453 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 TMEM98Q9Y2Y6 226 aa14.95□□□□□ -0.02
DDR1-278ENST00000515233 UBR5O95071 2799 aaPredicted RBP14.95□□□□□ -0.02
DDR1-278ENST00000515233 ZFC3H1O60293 1989 aaKnown RBP14.94□□□□□ -0.02
DDR1-278ENST00000515233 A0A0J9YYE9 177 aa14.94□□□□□ -0.02
DDR1-278ENST00000515233 CAPN5O15484 640 aaPredicted RBP14.94□□□□□ -0.02
DDR1-278ENST00000515233 TRBC1P01850 177 aa14.94□□□□□ -0.02
DDR1-278ENST00000515233 LIFP15018 202 aa14.94□□□□□ -0.02
DDR1-278ENST00000515233 TCF4P15884 667 aa14.94□□□□□ -0.02
DDR1-278ENST00000515233 CTPS1P17812 591 aa14.94□□□□□ -0.02
DDR1-278ENST00000515233 MPSTP25325 297 aa14.94□□□□□ -0.02
DDR1-278ENST00000515233 PIGHQ14442 188 aaPredicted RBP14.94□□□□□ -0.02
DDR1-278ENST00000515233 SMTNL2Q2TAL5 461 aa14.94□□□□□ -0.02
DDR1-278ENST00000515233 DCAF12Q5T6F0 453 aa14.94□□□□□ -0.02
DDR1-278ENST00000515233 E4F1Q66K89 784 aaPredicted RBP14.94□□□□□ -0.02
DDR1-278ENST00000515233 LRRC66Q68CR7 880 aa14.94□□□□□ -0.02
DDR1-278ENST00000515233 DOK6Q6PKX4 331 aa14.94□□□□□ -0.02
DDR1-278ENST00000515233 RFLNAQ6ZTI6 216 aa14.94□□□□□ -0.02
DDR1-278ENST00000515233 CACNA2D3Q8IZS8 1091 aa14.94□□□□□ -0.02
DDR1-278ENST00000515233 EXD1Q8NHP7 514 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms