RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 PECAM1P16284 738 aaPredicted RBP24.4■■□□□ 1.5
SNF8-213ENST00000514929 POLD2P49005 469 aa24.4■■□□□ 1.5
SNF8-213ENST00000514929 MARCKSL1P49006 195 aa24.4■■□□□ 1.5
SNF8-213ENST00000514929 NAP1L1P55209 391 aaKnown RBP24.4■■□□□ 1.5
SNF8-213ENST00000514929 ILF3Q12906 894 aaKnown RBP eCLIP24.4■■□□□ 1.5
SNF8-213ENST00000514929 C19orf48Q6RUI8 117 aa24.4■■□□□ 1.5
SNF8-213ENST00000514929 KDELC2Q7Z4H8 507 aa24.4■■□□□ 1.5
SNF8-213ENST00000514929 NLRP8Q86W28 1048 aa24.4■■□□□ 1.5
SNF8-213ENST00000514929 RAVER1Q8IY67 606 aaKnown RBP24.4■■□□□ 1.5
SNF8-213ENST00000514929 GPR156Q8NFN8 814 aa24.4■■□□□ 1.5
SNF8-213ENST00000514929 CCHCR1Q8TD31 782 aa24.4■■□□□ 1.5
SNF8-213ENST00000514929 P3H4Q92791 437 aa24.4■■□□□ 1.5
SNF8-213ENST00000514929 RBM41Q96IZ5 413 aaKnown RBP24.4■■□□□ 1.5
SNF8-213ENST00000514929 DCBLD2Q96PD2 775 aa24.4■■□□□ 1.5
SNF8-213ENST00000514929 RIOK2Q9BVS4 552 aaKnown RBP24.4■■□□□ 1.5
SNF8-213ENST00000514929 SLC17A4Q9Y2C5 497 aa24.4■■□□□ 1.5
SNF8-213ENST00000514929 ACACAQ13085 2346 aa24.4■■□□□ 1.5
SNF8-213ENST00000514929 ASXL3Q9C0F0 2248 aa24.39■■□□□ 1.5
SNF8-213ENST00000514929 hCG_1818297A0A087WSY0 165 aa24.39■■□□□ 1.49
SNF8-213ENST00000514929 SOD1P00441 154 aa24.39■■□□□ 1.49
SNF8-213ENST00000514929 FUCA1P04066 466 aa24.39■■□□□ 1.49
SNF8-213ENST00000514929 SPIDRQ14159 915 aa24.39■■□□□ 1.49
SNF8-213ENST00000514929 PRKD1Q15139 912 aaPredicted RBP24.39■■□□□ 1.49
SNF8-213ENST00000514929 PCSK7Q16549 785 aa24.39■■□□□ 1.49
SNF8-213ENST00000514929 TEX44Q53QW1 395 aa24.39■■□□□ 1.49
SNF8-213ENST00000514929 OGFOD3Q6PK18 319 aa24.39■■□□□ 1.49
SNF8-213ENST00000514929 EXD1Q8NHP7 514 aa24.39■■□□□ 1.49
SNF8-213ENST00000514929 CALR3Q96L12 384 aaKnown RBP24.39■■□□□ 1.49
SNF8-213ENST00000514929 AGAP2Q99490 1192 aa24.39■■□□□ 1.49
SNF8-213ENST00000514929 GSDMCQ9BYG8 508 aa24.39■■□□□ 1.49
SNF8-213ENST00000514929 GLOD4Q9HC38 313 aa24.39■■□□□ 1.49
SNF8-213ENST00000514929 TRNAU1APQ9NX07 287 aaKnown RBP24.39■■□□□ 1.49
SNF8-213ENST00000514929 PKD2L2Q9NZM6 624 aa24.39■■□□□ 1.49
SNF8-213ENST00000514929 LHX6Q9UPM6 363 aa24.39■■□□□ 1.49
SNF8-213ENST00000514929 RCCD1A6NED2 376 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 MPOP05164 745 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 PTPN3P26045 913 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 GABREP78334 506 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 ADCY2Q08462 1091 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 C14orf28Q4W4Y0 310 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 RAD9BQ6WBX8 426 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 TRIM74Q86UV6 250 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 KIAA1524Q8TCG1 905 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 GPBAR1Q8TDU6 330 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 PTCD2Q8WV60 388 aaKnown RBP24.38■■□□□ 1.49
SNF8-213ENST00000514929 HNRNPLLQ8WVV9 542 aaKnown RBP24.38■■□□□ 1.49
SNF8-213ENST00000514929 KRT35Q92764 455 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 GRAMD1AQ96CP6 724 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 HAUS1Q96CS2 278 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 HIC2Q96JB3 615 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 TEKT5Q96M29 485 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 TRIB3Q96RU7 358 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 RABGEF1Q9UJ41 708 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 TMEM98Q9Y2Y6 226 aa24.38■■□□□ 1.49
SNF8-213ENST00000514929 CASC3O15234 703 aaKnown RBP24.37■■□□□ 1.49
SNF8-213ENST00000514929 INPP4BO15327 924 aa24.37■■□□□ 1.49
SNF8-213ENST00000514929 TLX3O43711 291 aaPredicted RBP24.37■■□□□ 1.49
SNF8-213ENST00000514929 NOBOXO60393 691 aa24.37■■□□□ 1.49
SNF8-213ENST00000514929 IVLP07476 585 aa24.37■■□□□ 1.49
SNF8-213ENST00000514929 ACTN2P35609 894 aa24.37■■□□□ 1.49
SNF8-213ENST00000514929 SPINT3P49223 89 aa24.37■■□□□ 1.49
SNF8-213ENST00000514929 CDK18Q07002 472 aa24.37■■□□□ 1.49
SNF8-213ENST00000514929 SLC14A2Q15849 920 aa24.37■■□□□ 1.49
SNF8-213ENST00000514929 CCDC70Q6NSX1 233 aa24.37■■□□□ 1.49
SNF8-213ENST00000514929 ZC3H18Q86VM9 953 aaKnown RBP24.37■■□□□ 1.49
SNF8-213ENST00000514929 SPATA22Q8NHS9 363 aa24.37■■□□□ 1.49
SNF8-213ENST00000514929 FAM83DQ9H4H8 585 aa24.37■■□□□ 1.49
SNF8-213ENST00000514929 POLR1BQ9H9Y6 1135 aa24.37■■□□□ 1.49
SNF8-213ENST00000514929 RALYQ9UKM9 306 aaKnown RBP24.37■■□□□ 1.49
SNF8-213ENST00000514929 ENTPD2Q9Y5L3 495 aa24.37■■□□□ 1.49
SNF8-213ENST00000514929 DUSP10Q9Y6W6 482 aa24.37■■□□□ 1.49
SNF8-213ENST00000514929 DSPP15924 2871 aaKnown RBP24.37■■□□□ 1.49
SNF8-213ENST00000514929 RP1P56715 2156 aa24.37■■□□□ 1.49
SNF8-213ENST00000514929 MTSS1O43312 755 aa24.36■■□□□ 1.49
SNF8-213ENST00000514929 ASMTLO95671 621 aa24.36■■□□□ 1.49
SNF8-213ENST00000514929 MT-CYBP00156 380 aaPredicted RBP24.36■■□□□ 1.49
SNF8-213ENST00000514929 GLB1P16278 677 aa24.36■■□□□ 1.49
SNF8-213ENST00000514929 ADCY8P40145 1251 aa24.36■■□□□ 1.49
SNF8-213ENST00000514929 PPP2R5EQ16537 467 aa24.36■■□□□ 1.49
SNF8-213ENST00000514929 CERCAMQ5T4B2 595 aa24.36■■□□□ 1.49
SNF8-213ENST00000514929 MARK2Q7KZI7 788 aaKnown RBP24.36■■□□□ 1.49
SNF8-213ENST00000514929 LYSMD3Q7Z3D4 306 aa24.36■■□□□ 1.49
SNF8-213ENST00000514929 SFTPA2Q8IWL1 248 aa24.36■■□□□ 1.49
SNF8-213ENST00000514929 LSMEM2Q8N112 164 aa24.36■■□□□ 1.49
SNF8-213ENST00000514929 ACRBPQ8NEB7 543 aa24.36■■□□□ 1.49
SNF8-213ENST00000514929 FGF11Q92914 225 aa24.36■■□□□ 1.49
SNF8-213ENST00000514929 TADA1Q96BN2 335 aa24.36■■□□□ 1.49
SNF8-213ENST00000514929 ATXN7L3BQ96GX2 97 aa24.36■■□□□ 1.49
SNF8-213ENST00000514929 BAG1Q99933 345 aaPredicted RBP24.36■■□□□ 1.49
SNF8-213ENST00000514929 HEMGNQ9BXL5 484 aa24.36■■□□□ 1.49
SNF8-213ENST00000514929 CDH19Q9H159 772 aa24.36■■□□□ 1.49
SNF8-213ENST00000514929 ZFYVE1Q9HBF4 777 aa24.36■■□□□ 1.49
SNF8-213ENST00000514929 SPATS2LQ9NUQ6 558 aaKnown RBP24.36■■□□□ 1.49
SNF8-213ENST00000514929 REXO2Q9Y3B8 237 aaKnown RBP24.36■■□□□ 1.49
SNF8-213ENST00000514929 CHD6Q8TD26 2715 aa24.36■■□□□ 1.49
SNF8-213ENST00000514929 A0A087WV48 116 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 RGSL1A5PLK6 1076 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 NTN3O00634 580 aaPredicted RBP24.35■■□□□ 1.49
SNF8-213ENST00000514929 PMPCBO75439 489 aa24.35■■□□□ 1.49
SNF8-213ENST00000514929 RPLP0P05388 317 aaKnown RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms