RNA–Protein interactions for RNA: ENST00000514649.5

TNFRSF8-205, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,412 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-205ENST00000514649 HLA-DQB2P05538 268 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 HSD17B1P14061 328 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 DARSP14868 501 aaKnown RBP18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 LEPRP48357 1165 aaKnown RBP18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 SH3BP2P78314 561 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 PCSK7Q16549 785 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 RGS21Q2M5E4 152 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 XKR4Q5GH76 650 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 RAB41Q5JT25 222 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 AARS2Q5JTZ9 985 aaKnown RBP18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 ZNF362Q5T0B9 420 aaPredicted RBP18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 GPR158Q5T848 1215 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 KIAA0408Q6ZU52 694 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 ADGRG5Q8IZF4 528 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 MINDY1Q8N5J2 469 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 SH3RF2Q8TEC5 729 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 TRUB1Q8WWH5 349 aaKnown RBP18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 PCED1BQ96HM7 432 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 MYRFLQ96LU7 910 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 ADARB2Q9NS39 739 aaKnown RBP18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 GIN1Q9NXP7 522 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 ACTR3BQ9P1U1 418 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 NDUFAF1Q9Y375 327 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 SLC30A1Q9Y6M5 507 aa18.12■□□□□ 0.49
TNFRSF8-205ENST00000514649 FXYD1O00168 92 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 EI24O14681 340 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 CNOT3O75175 753 aaKnown RBP18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 RASAL1O95294 804 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 SLC6A2P23975 617 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 ZNF135P52742 658 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 GRB7Q14451 532 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 LCN8Q6JVE9 175 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 OGFOD2Q6N063 350 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 CHST15Q7LFX5 561 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 SPRED1Q7Z699 444 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 ISCA2Q86U28 154 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 LDB1Q86U70 411 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 TAC4Q86UU9 113 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 CLYBLQ8N0X4 340 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 TMEM40Q8WWA1 233 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 SEPT8Q92599 483 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 TRMOQ9BU70 441 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 SLC39A8Q9C0K1 460 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 SOX17Q9H6I2 414 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 RBM22Q9NW64 420 aaKnown RBP eCLIP18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 DSEQ9UL01 958 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 VWA7Q9Y334 891 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 TSC22D4Q9Y3Q8 395 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 TIMM13Q9Y5L4 95 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 LSM1O15116 133 aaKnown RBP18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 ANGPT2O15123 496 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 ARPC2O15144 300 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 MATN3O15232 486 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 CLCN5P51795 746 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 TNK2Q07912 1038 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 ABRAXAS1Q6UWZ7 409 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 KCTD8Q6ZWB6 473 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 TRPV3Q8NET8 790 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 EMID1Q96A84 441 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 CGREF1Q99674 301 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 NDFIP2Q9NV92 336 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 NEU3Q9UQ49 428 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 ERGIC3Q9Y282 383 aa18.11■□□□□ 0.49
TNFRSF8-205ENST00000514649 UNCXA6NJT0 531 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 SNAP91O60641 907 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 MTHFD1P11586 935 aaKnown RBP18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 S100A1P23297 94 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 YAP1P46937 504 aaKnown RBP18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 EIF2B2P49770 351 aaKnown RBP18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 CDKN2DP55273 166 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 SLC14A2Q15849 920 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 DEPDC1Q5TB30 811 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 PRMT9Q6P2P2 845 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 LRRC58Q96CX6 371 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 L3HYPDHQ96EM0 354 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 TSPAN17Q96FV3 270 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 PRKD2Q9BZL6 878 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 CD320Q9NPF0 282 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 ATAD3AQ9NVI7 634 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 TMEM9Q9P0T7 183 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 ZFC3H1O60293 1989 aaKnown RBP18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 TTC24A2A3L6 582 aaPredicted RBP18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 KDM1AO60341 852 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 SOX11P35716 441 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 FOXA1P55317 472 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 BNIP2Q12982 314 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 BNIP3Q12983 259 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 PLCL1Q15111 1095 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 FXNQ16595 210 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 CYP51A1Q16850 503 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 CYBRD1Q53TN4 286 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 UBXN11Q5T124 520 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 TMTC4Q5T4D3 741 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 IFNEQ86WN2 208 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 DDIASQ8IXT1 998 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 MIER2Q8N344 545 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 DHRSXQ8N5I4 330 aa18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 MAGEE2Q8TD90 523 aaPredicted RBP18.1■□□□□ 0.49
TNFRSF8-205ENST00000514649 EXT2Q93063 718 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms