RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 CCDC173Q0VFZ6 552 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 ILF3Q12906 894 aaKnown RBP eCLIP10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 SOWAHCQ53LP3 525 aaPredicted RBP10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 SPRED1Q7Z699 444 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 B3GNT8Q7Z7M8 397 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 NLRP8Q86W28 1048 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 C17orf82Q86X59 251 aaPredicted RBP10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 CCNJLQ8IV13 435 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 RHOT1Q8IXI2 618 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 CNTD1Q8N815 330 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 TC2NQ8N9U0 490 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 LPCAT1Q8NF37 534 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 WDR36Q8NI36 951 aaKnown RBP10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 SCAMP4Q969E2 229 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 AP2M1Q96CW1 435 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 COX14Q96I36 57 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 SLC46A1Q96NT5 459 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 GSDMCQ9BYG8 508 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 LRRN3Q9H3W5 708 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 DDX56Q9NY93 547 aaKnown RBP10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 GOLGA6AQ9NYA3 693 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 HEY1Q9Y5J3 304 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 ST14Q9Y5Y6 855 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 RNF215Q9Y6U7 377 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 BPTFQ12830 3046 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 SHROOM3Q8TF72 1996 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 CDRT15L2A8MXV6 281 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 PPP1R12AO14974 1030 aaPredicted RBP10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 LCA5LO95447 670 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 CLDN7O95471 211 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 ZFXP17010 805 aaPredicted RBP10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 CCKBRP32239 447 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 ADCY8P40145 1251 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 POLD2P49005 469 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 HADHBP55084 474 aaKnown RBP10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 EIF3IQ13347 325 aaKnown RBP10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 NR1D2Q14995 579 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 PDK1Q15118 436 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 SLC14A2Q15849 920 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 TAZQ16635 292 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 QPCTQ16769 361 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 DOK6Q6PKX4 331 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 NPNTQ6UXI9 565 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 ZNF438Q7Z4V0 828 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 CLEC14AQ86T13 490 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 NRSN1Q8IZ57 195 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 ZDHHC1Q8WTX9 485 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 TADA1Q96BN2 335 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 FCRL3Q96P31 734 aaPredicted RBP10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 BBC3Q96PG8 261 aaPredicted RBP10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 TRIB3Q96RU7 358 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 WDR24Q96S15 920 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 AGAP2Q99490 1192 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 CDH19Q9H159 772 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 DPEP2Q9H4A9 486 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 SUDS3Q9H7L9 328 aaPredicted RBP10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 SPATS2LQ9NUQ6 558 aaKnown RBP10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 TAAR2Q9P1P5 351 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 LRIT1Q9P2V4 623 aa10.41□□□□□ -0.74
HMGXB3-205ENST00000514469 KALRNO60229 2985 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 C1orf232A0A0U1RR37 186 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 ANKRD66B4E2M5 251 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 TMX2-CTNND1H3BSU7 103 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 PLD2O14939 933 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 PSTPIP1O43586 416 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 SPOPO43791 374 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 FGF1P05230 155 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 ITGA2BP08514 1039 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 COMTP21964 271 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 AK4P27144 223 aaPredicted RBP10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 RBMS1P29558 406 aaKnown RBP10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 CDKN2BP42772 138 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 INHBCP55103 352 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 MAZP56270 477 aaKnown RBP10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 B4GALNT1Q00973 533 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 CTBSQ01459 385 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 AP1B1Q10567 949 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 PRKD1Q15139 912 aaPredicted RBP10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 HENMT1Q5T8I9 393 aaKnown RBP10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 SLC30A9Q6PML9 568 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 MFSD7Q6UXD7 560 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 TRIM74Q86UV6 250 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 RFX6Q8HWS3 928 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 ARL14Q8N4G2 192 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 Q8N9G6 341 aaPredicted RBP10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 EXD1Q8NHP7 514 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 KCNE4Q8WWG9 221 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 RNF25Q96BH1 459 aaPredicted RBP10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 IMP4Q96G21 291 aaKnown RBP10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 TMEM74Q96NL1 305 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 OR2M4Q96R27 311 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 UBL7Q96S82 380 aaPredicted RBP10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 ANP32EQ9BTT0 268 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 RIOK2Q9BVS4 552 aaKnown RBP10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 MAK16Q9BXY0 300 aaKnown RBP10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 ADGRE3Q9BY15 652 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 CEP41Q9BYV8 373 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 DPH1Q9BZG8 443 aa10.4□□□□□ -0.74
HMGXB3-205ENST00000514469 FOXP3Q9BZS1 431 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms