RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 C5orf60A6NFR6 353 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 ANKRD66B4E2M5 251 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 TOR1BO14657 336 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 TM4SF5O14894 197 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 RAD51BO15315 384 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 OPHN1O60890 802 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 GCATO75600 419 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 CER1O95813 267 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 CPP00450 1065 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 AGTP01019 485 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 PRLP01236 227 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 PRKCGP05129 697 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 MMP2P08253 660 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 PDHA1P08559 390 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 ZSCAN5DPP0CG00 497 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 NR1D1P20393 614 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 RBL1P28749 1068 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 VIPR1P32241 457 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 CD68P34810 354 aaPredicted RBP8.33□□□□□ -1.08
CCL28-204ENST00000514421 ID4P47928 161 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 EPHB1P54762 984 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 GDF10P55107 478 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 NXPH1P58417 271 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 SEMG2Q02383 582 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 SLC14A1Q13336 389 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 PUM1Q14671 1186 aaKnown RBP eCLIP8.33□□□□□ -1.08
CCL28-204ENST00000514421 AGERQ15109 404 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 TRIP13Q15645 432 aaPredicted RBP8.33□□□□□ -1.08
CCL28-204ENST00000514421 SLC14A2Q15849 920 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 KCTD19Q17RG1 926 aaPredicted RBP8.33□□□□□ -1.08
CCL28-204ENST00000514421 UAP1L1Q3KQV9 507 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 LIPIQ6XZB0 460 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 ABI3BPQ7Z7G0 1075 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 TDRPQ86YL5 185 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 CDKL3Q8IVW4 592 aaPredicted RBP8.33□□□□□ -1.08
CCL28-204ENST00000514421 MINDY1Q8N5J2 469 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 ARFGAP2Q8N6H7 521 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 DENND6BQ8NEG7 585 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 CPT1BQ92523 772 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 QKIQ96PU8 341 aaKnown RBP eCLIP8.33□□□□□ -1.08
CCL28-204ENST00000514421 FCRL5Q96RD9 977 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 RBM15Q96T37 977 aaKnown RBP eCLIP8.33□□□□□ -1.08
CCL28-204ENST00000514421 KLF6Q99612 283 aaPredicted RBP8.33□□□□□ -1.08
CCL28-204ENST00000514421 TDRD1Q9BXT4 1180 aaKnown RBP8.33□□□□□ -1.08
CCL28-204ENST00000514421 CEP41Q9BYV8 373 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 GAREM1Q9H706 876 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 C10orf88Q9H8K7 445 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 ERVMER34-1Q9H9K5 563 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 DNAAF2Q9NVR5 837 aaKnown RBP8.33□□□□□ -1.08
CCL28-204ENST00000514421 NINJ2Q9NZG7 142 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 KLHL8Q9P2G9 620 aaPredicted RBP8.33□□□□□ -1.08
CCL28-204ENST00000514421 B4GALT6Q9UBX8 382 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 LGALS13Q9UHV8 139 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 CDV3Q9UKY7 258 aaKnown RBP8.33□□□□□ -1.08
CCL28-204ENST00000514421 CHKBQ9Y259 395 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 CA5BQ9Y2D0 317 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 SPTBN2O15020 2390 aa8.33□□□□□ -1.08
CCL28-204ENST00000514421 ASCC3Q8N3C0 2202 aaKnown RBP8.33□□□□□ -1.08
CCL28-204ENST00000514421 A0A0J9YYE9 177 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 POM121BA6NF01 834 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 A8MX80 341 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 RECQL5O94762 991 aaPredicted RBP8.32□□□□□ -1.08
CCL28-204ENST00000514421 STK10O94804 968 aaKnown RBP8.32□□□□□ -1.08
CCL28-204ENST00000514421 EPOP01588 193 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 TRBC1P01850 177 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 ELFN1P0C7U0 828 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 ZNF883P0CG24 379 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 THEGLP0DJG4 465 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 C6P13671 934 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 ETS1P14921 441 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 CTPS1P17812 591 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 HNF1BP35680 557 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 MMP12P39900 470 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 MAGEA4P43358 317 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 RABIFP47224 123 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 RXRGP48443 463 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 CLDN2P57739 230 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 YPEL5P62699 121 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 CDK18Q07002 472 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 IFFO1Q0D2I5 559 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 RALGDSQ12967 914 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 ARHGEF7Q14155 803 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 KCNJ11Q14654 390 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 SUZ12Q15022 739 aaKnown RBP8.32□□□□□ -1.08
CCL28-204ENST00000514421 LRRC14Q15048 493 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 ACOX1Q15067 660 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 ZNF423Q2M1K9 1284 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 WSCD2Q2TBF2 565 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 KRT71Q3SY84 523 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 PRAMEF14Q5SWL7 426 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 FAM182AQ5T1J6 154 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 UBAP2Q5T6F2 1119 aaKnown RBP8.32□□□□□ -1.08
CCL28-204ENST00000514421 DBX2Q6ZNG2 339 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 GCNT7Q6ZNI0 430 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 Q6ZSR6 202 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 USP45Q70EL2 814 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 NLRP8Q86W28 1048 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 RAVER1Q8IY67 606 aaKnown RBP8.32□□□□□ -1.08
CCL28-204ENST00000514421 ZNF567Q8N184 647 aa8.32□□□□□ -1.08
CCL28-204ENST00000514421 RIBC1Q8N443 379 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms