RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 STX17P56962 302 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 YBEYP58557 167 aaPredicted RBP10.44□□□□□ -0.74
CLDND1-227ENST00000513452 HHEXQ03014 270 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 BCL2L1Q07817 233 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 DNASE1L3Q13609 305 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 NR6A1Q15406 480 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 CNGA3Q16281 694 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 PARP15Q460N3 678 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 RAET1GQ6H3X3 334 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 MARK2Q7KZI7 788 aaKnown RBP10.44□□□□□ -0.74
CLDND1-227ENST00000513452 LYSMD3Q7Z3D4 306 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 SRLQ86TD4 932 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 RASGRP3Q8IV61 690 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 PYROXD2Q8N2H3 581 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 SFRP1Q8N474 314 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 FNIP1Q8TF40 1166 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 MARVELD3Q96A59 401 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 ECHDC3Q96DC8 303 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 ELMO2Q96JJ3 720 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 C5orf34Q96MH7 638 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 MFRPQ9BY79 579 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 ACTL8Q9H568 366 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 PDFQ9HBH1 243 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 SLAMF7Q9NQ25 335 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 B4GALT6Q9UBX8 382 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 LNPEPQ9UIQ6 1025 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 SLC17A4Q9Y2C5 497 aa10.44□□□□□ -0.74
CLDND1-227ENST00000513452 PCDHGA9Q9Y5G4 932 aaKnown RBP10.44□□□□□ -0.74
CLDND1-227ENST00000513452 SETD2Q9BYW2 2564 aaPredicted RBP10.43□□□□□ -0.74
CLDND1-227ENST00000513452 ARHGAP10A1A4S6 786 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 BICDL2A1A5D9 508 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 J3KR12 359 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 FOXN3O00409 490 aaPredicted RBP10.43□□□□□ -0.74
CLDND1-227ENST00000513452 LRCH4O75427 683 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 NDUFA10O95299 355 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 SDC4P31431 198 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 ETV3P41162 512 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 GARSP41250 739 aaKnown RBP10.43□□□□□ -0.74
CLDND1-227ENST00000513452 CCL11P51671 97 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 NAA30Q147X3 362 aaPredicted RBP10.43□□□□□ -0.74
CLDND1-227ENST00000513452 CCDC14Q49A88 953 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 TAF3Q5VWG9 929 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 JMJD6Q6NYC1 403 aaPredicted RBP10.43□□□□□ -0.74
CLDND1-227ENST00000513452 ARCQ7LC44 396 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 TRIM74Q86UV6 250 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 TP53INP2Q8IXH6 220 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 FMR1NBQ8N0W7 255 aaPredicted RBP10.43□□□□□ -0.74
CLDND1-227ENST00000513452 Q8NA96 180 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 TTC13Q8NBP0 860 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 TSEN2Q8NCE0 465 aaKnown RBP10.43□□□□□ -0.74
CLDND1-227ENST00000513452 MSANTD4Q8NCY6 345 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 GPT2Q8TD30 523 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 CT55Q8WUE5 264 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 RXFP2Q8WXD0 754 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 GDPD2Q9HCC8 539 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 ACSS2Q9NR19 701 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 TMEM98Q9Y2Y6 226 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 PCDHGA6Q9Y5G7 932 aa10.43□□□□□ -0.74
CLDND1-227ENST00000513452 PRRC2CQ9Y520 2896 aaKnown RBP10.42□□□□□ -0.74
CLDND1-227ENST00000513452 MN1Q10571 1320 aaPredicted RBP10.42□□□□□ -0.74
CLDND1-227ENST00000513452 ARGFXA6NJG6 315 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 KRT86O43790 486 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 PRAMEF11O60813 436 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 ANKRD34CP0C6C1 535 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 PPP1R2P41236 205 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 CSNK1DP48730 415 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 EPHA4P54764 986 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 GFERP55789 205 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 HDAC4P56524 1084 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 RPS18P62269 152 aaKnown RBP10.42□□□□□ -0.74
CLDND1-227ENST00000513452 POLR2LP62875 67 aaKnown RBP10.42□□□□□ -0.74
CLDND1-227ENST00000513452 SH3BP2P78314 561 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 CHRNA6Q15825 494 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 EXOC3L4Q17RC7 722 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 NAA35Q5VZE5 725 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 SLC6A19Q695T7 634 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 GBP6Q6ZN66 633 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 HSD11B1LQ7Z5J1 315 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 ZC3H18Q86VM9 953 aaKnown RBP10.42□□□□□ -0.74
CLDND1-227ENST00000513452 GALNT13Q8IUC8 556 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 PLXDC1Q8IUK5 500 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 SLC34A3Q8N130 599 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 UMODL1-AS1Q8N2C9 162 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 FAM172AQ8WUF8 416 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 CPA5Q8WXQ8 436 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 C19orf60Q96EN9 201 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 DTD2Q96FN9 168 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 SCARF2Q96GP6 870 aaPredicted RBP10.42□□□□□ -0.74
CLDND1-227ENST00000513452 OR6C1Q96RD1 312 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 RUFY1Q96T51 708 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 CINPQ9BW66 212 aaPredicted RBP10.42□□□□□ -0.74
CLDND1-227ENST00000513452 STN1Q9H668 368 aaKnown RBP10.42□□□□□ -0.74
CLDND1-227ENST00000513452 MLXIPLQ9NP71 852 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 SARS2Q9NP81 518 aaKnown RBP10.42□□□□□ -0.74
CLDND1-227ENST00000513452 SIX2Q9NPC8 291 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 DNAJC12Q9UKB3 198 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 MAN1B1Q9UKM7 699 aa10.42□□□□□ -0.74
CLDND1-227ENST00000513452 WASH4PA8MWX3 477 aa10.41□□□□□ -0.74
CLDND1-227ENST00000513452 PPP1R3GB7ZBB8 358 aa10.41□□□□□ -0.74
CLDND1-227ENST00000513452 C21orf140B9A014 251 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms