RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 CXCL8P10145 99 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 MYF5P13349 255 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 GPD1P21695 349 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 ELAVL4P26378 380 aaKnown RBP3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 PSMA5P28066 241 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 PCSK1P29120 753 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 WASP42768 502 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 GUCY2FP51841 1108 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 CHN2P52757 468 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 BCAT1P54687 386 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 NRG3P56975 720 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 C21orf59P57076 290 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 CCT2P78371 535 aaKnown RBP3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 KDSRQ06136 332 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 SPAG1Q07617 926 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 ST3GAL1Q11201 340 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 ORC2Q13416 577 aaPredicted RBP3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 FHL1Q13642 323 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 ANO4Q32M45 955 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 ADCK5Q3MIX3 580 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 LINC00303Q3SY05 128 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 FUT11Q495W5 492 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 SFMBT2Q5VUG0 894 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 WSCD1Q658N2 575 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 HAUS3Q68CZ6 603 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 BLOC1S2Q6QNY1 142 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 TMEM25Q86YD3 366 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 CCDC83Q8IWF9 413 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 EID2Q8N6I1 236 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 SPATA20Q8TB22 786 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 OVCA2Q8WZ82 227 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 HPS3Q969F9 1004 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 RGMAQ96B86 450 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 BIRC7Q96CA5 298 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 AHCYL2Q96HN2 611 aaKnown RBP3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 C8orf48Q96LL4 319 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 SLITRK1Q96PX8 696 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 CCNL2Q96S94 520 aaPredicted RBP3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 PKMYT1Q99640 499 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 PYM1Q9BRP8 204 aaKnown RBP3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 KIFC3Q9BVG8 833 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 BTBD1Q9H0C5 482 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 SLC25A18Q9H1K4 315 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 BHMT2Q9H2M3 363 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 ASCL3Q9NQ33 180 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 TMLHEQ9NVH6 421 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 COMMD8Q9NX08 183 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 GDAP2Q9NXN4 497 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 DPP3Q9NY33 737 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 THAP10Q9P2Z0 257 aaPredicted RBP3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 LRWD1Q9UFC0 647 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 CPSF3Q9UKF6 684 aaKnown RBP3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 GTF3C4Q9UKN8 822 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 SCML1Q9UN30 329 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 DNM3Q9UQ16 869 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 SPEF1Q9Y4P9 236 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 PAXBP1Q9Y5B6 917 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 PCDHGA8Q9Y5G5 932 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 STON1Q9Y6Q2 735 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 POLQO75417 2590 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 SETD2Q9BYW2 2564 aaPredicted RBP3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 A0A0B4J269 797 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 A0A1W2PPC4 97 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 GABRDO14764 452 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 PPEF2O14830 753 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 FAM189A1O60320 539 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 NEMFO60524 1076 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 USP12O75317 370 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 RTN3O95197 1032 aaPredicted RBP3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 PCDH8O95206 1070 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 APOL3O95236 402 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 SEMA4FO95754 770 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 PIGRP01833 764 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 OR52Z1P0C646 297 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 MBL2P11226 248 aaPredicted RBP3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 HARSP12081 509 aaKnown RBP3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 TYRP14679 529 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 XPAP23025 273 aaPredicted RBP3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 ANXA13P27216 316 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 EPHA8P29322 1005 aaPredicted RBP3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 ACSL1P33121 698 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 MATR3P43243 847 aaKnown RBP eCLIP3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 TUBP50607 506 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 DUSP3P51452 185 aaPredicted RBP3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 COPAP53621 1224 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 CDH8P55286 799 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 TUBA4AP68366 448 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 OVGP1Q12889 678 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 MORC3Q14149 939 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 TMEM132DQ14C87 1099 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 LLGL1Q15334 1064 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 SHBQ15464 509 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 SLC45A4Q5BKX6 768 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 HECTD3Q5T447 861 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 SDHAF4Q5VUM1 108 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 RUSC1-AS1Q66K80 236 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 JADE1Q6IE81 842 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 KDM7AQ6ZMT4 941 aa3.81□□□□□ -1.8
PDLIM5-218ENST00000513341 C1orf186Q6ZWK4 172 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms