RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 OR6N1Q8NGY5 312 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 UBASH3BQ8TF42 649 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 CHTF18Q8WVB6 975 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 BAP1Q92560 729 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 IRF7Q92985 503 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 ARL5BQ96KC2 179 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 SLC26A4O43511 780 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 RENP00797 406 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 CXCR1P25024 350 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 GHRHRQ02643 423 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 DPYSQ14117 519 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 VGLL4Q14135 290 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 CDK10Q15131 360 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 TOR1AIP1Q5JTV8 583 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 KCNT1Q5JUK3 1230 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 KIAA0895LQ68EN5 471 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 AFTPHQ6ULP2 937 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 LCTLQ6UWM7 567 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 ZNF610Q8N9Z0 462 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 CADM1Q9BY67 442 aaKnown RBP8.92□□□□□ -0.98
VCAN-208ENST00000512590 DDX47Q9H0S4 455 aaKnown RBP8.92□□□□□ -0.98
VCAN-208ENST00000512590 PPCSQ9HAB8 311 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 ETNK1Q9HBU6 452 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 GDF3Q9NR23 364 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 CLN6Q9NWW5 311 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 A0A0G2JMP0 313 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.92□□□□□ -0.98
VCAN-208ENST00000512590 GRID2IPA4D2P6 1211 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 VIL1P09327 827 aaKnown RBP8.92□□□□□ -0.98
VCAN-208ENST00000512590 CXCR3P49682 368 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 CSTF1Q05048 431 aaKnown RBP8.92□□□□□ -0.98
VCAN-208ENST00000512590 SCN1BQ07699 218 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 FASTKD3Q14CZ7 662 aaKnown RBP8.92□□□□□ -0.98
VCAN-208ENST00000512590 PITRM1Q5JRX3 1037 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 UBXN11Q5T124 520 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 IL23RQ5VWK5 629 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 TAPT1Q6NXT6 567 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 FRRS1Q6ZNA5 592 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 PRICKLE2Q7Z3G6 844 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 DCP2Q8IU60 420 aaKnown RBP8.92□□□□□ -0.98
VCAN-208ENST00000512590 FAM126BQ8IXS8 530 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 SLC43A3Q8NBI5 491 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 KREMEN2Q8NCW0 462 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 OR4M2Q8NGB6 313 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 ANKRD27Q96NW4 1050 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 ABCB9Q9NP78 766 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 FBXO28Q9NVF7 368 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 PIH1D1Q9NWS0 290 aaKnown RBP8.92□□□□□ -0.98
VCAN-208ENST00000512590 PARPBPQ9NWS1 579 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 ACTR10Q9NZ32 417 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 STAP2Q9UGK3 403 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 MFHAS1Q9Y4C4 1052 aa8.92□□□□□ -0.98
VCAN-208ENST00000512590 SPATA31A1Q5TZJ5 1347 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 CDHR2Q9BYE9 1310 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 SNAP23O00161 211 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 LGALS2P05162 132 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 SRCP12931 536 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 ITGA2P17301 1181 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 OCLNQ16625 522 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 SEL1L3Q68CR1 1132 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 Q96MT0 163 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 AP1S3Q96PC3 154 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 COMMD4Q9H0A8 199 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 FN3KQ9H479 309 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 SEC61A2Q9H9S3 476 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 KCTD5Q9NXV2 234 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 NCKIPSDQ9NZQ3 722 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 DAPK2Q9UIK4 370 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 PCDHGC5Q9Y5F6 944 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 ZNF608Q9ULD9 1512 aaPredicted RBP8.91□□□□□ -0.98
VCAN-208ENST00000512590 FGF10O15520 208 aaPredicted RBP8.91□□□□□ -0.98
VCAN-208ENST00000512590 OR10H3O60404 316 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 KCNJ13O60928 360 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 ALOX5P09917 674 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 FCGR1AP12314 374 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 S100A1P23297 94 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 ECHS1P30084 290 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 ARSHQ5FYA8 562 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 ANXA8L1Q5VT79 327 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 QSOX2Q6ZRP7 698 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 ABHD13Q7L211 337 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 KCT2Q8NC54 265 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 PSMA8Q8TAA3 256 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 CPNE2Q96FN4 548 aaPredicted RBP8.91□□□□□ -0.98
VCAN-208ENST00000512590 MYO19Q96H55 970 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 KLF6Q99612 283 aaPredicted RBP8.91□□□□□ -0.98
VCAN-208ENST00000512590 MTA3Q9BTC8 594 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 UCK2Q9BZX2 261 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 RMI1Q9H9A7 625 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 CARS2Q9HA77 564 aaKnown RBP8.91□□□□□ -0.98
VCAN-208ENST00000512590 PLK2Q9NYY3 685 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 IKZF3Q9UKT9 509 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 LGR5O75473 907 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 ENDOUP21128 410 aaKnown RBP8.91□□□□□ -0.98
VCAN-208ENST00000512590 NDUFS1P28331 727 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 SLC34A1Q06495 639 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 C2orf80Q0P641 193 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 RIPOR1Q6ZS17 1223 aa8.91□□□□□ -0.98
VCAN-208ENST00000512590 MRPL41Q8IXM3 137 aaKnown RBP8.91□□□□□ -0.98
VCAN-208ENST00000512590 GPALPP1Q8IXQ4 340 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms