RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 COMPP49747 757 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 MRPL12P52815 198 aaKnown RBP3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 ZBED6P86452 979 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 CRYZQ08257 329 aaKnown RBP3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 DDR1Q08345 913 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 CDC16Q13042 620 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 IRF3Q14653 427 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 EFNB3Q15768 340 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 HLFQ16534 295 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 ASTE1Q2TB18 679 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 LRIF1Q5T3J3 769 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 MFSD4BQ5TF39 518 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 AWAT2Q6E213 333 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 PLEKHA7Q6IQ23 1121 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 DUS1LQ6P1R4 473 aaKnown RBP3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 CLEC17AQ6ZS10 378 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 CACNA2D4Q7Z3S7 1137 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 RNF168Q8IYW5 571 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 PELI3Q8N2H9 469 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 TMTC2Q8N394 836 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 CCDC89Q8N998 374 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 OR8K5Q8NH50 307 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 SCARB1Q8WTV0 552 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 MOAP1Q96BY2 351 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 ORAI1Q96D31 301 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 RSRC1Q96IZ7 334 aaKnown RBP3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 NEUROD6Q96NK8 337 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 GAD1Q99259 594 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 SEPT5Q99719 369 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 SRSF8Q9BRL6 282 aaKnown RBP3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 NTPCRQ9BSD7 190 aaKnown RBP3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 MXD3Q9BW11 206 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 C17orf75Q9HAS0 396 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 SETD4Q9NVD3 440 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 OGFRQ9NZT2 677 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 OR14J1Q9UGF5 321 aa3.44□□□□□ -1.86
TRAPPC11-207ENST00000511409 CKAP5Q14008 2032 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 A8MV72 311 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 SOCS6O14544 535 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 CTDSP2O14595 271 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 NDUFS7O75251 213 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 OAZ2O95190 189 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 GLUD1P00367 558 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 GABRB1P18505 474 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 ANXA7P20073 488 aaKnown RBP3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 SAT1P21673 171 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 ITGB8P26012 769 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 BDKRB2P30411 391 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 SLC15A1P46059 708 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 GLUD2P49448 558 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 RAD23BP54727 409 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 MFAP4P55083 255 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 TAS2R40P59535 323 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 CSNK2A1P68400 391 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 Q0VFX4 171 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 EPS8Q12929 822 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 TRAF2Q12933 501 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 GRIK2Q13002 908 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 AIMP2Q13155 320 aaKnown RBP3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 ACVR2BQ13705 512 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 CTF1Q16619 201 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 PNLIPRP3Q17RR3 467 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 AMZ1Q400G9 498 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 XKR9Q5GH70 373 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 PPP6R3Q5H9R7 873 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 RAB41Q5JT25 222 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 EFHC1Q5JVL4 640 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 PAPPA-AS1Q5QFB9 102 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 PLEKHS1Q5SXH7 462 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 JADE1Q6IE81 842 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 WDR73Q6P4I2 378 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 KCTD18Q6PI47 426 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 ENOSF1Q7L5Y1 443 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 SDCCAG8Q86SQ7 713 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 HJURPQ8NCD3 748 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 CSNK2A3Q8NEV1 391 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 FEM1CQ96JP0 617 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 PPP1R13BQ96KQ4 1090 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 OR1F2PQ96R84 312 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 NUDCD1Q96RS6 583 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 CSF3RQ99062 836 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 SH3GL2Q99962 352 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 PIGMQ9H3S5 423 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 NOX4Q9NPH5 578 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 ACSS1Q9NUB1 689 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 OCIAD1Q9NX40 245 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 RPS6KA6Q9UK32 745 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 AGO1Q9UL18 857 aaKnown RBP3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 PCDHA7Q9UN72 937 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 CLIC4Q9Y696 253 aa3.43□□□□□ -1.86
TRAPPC11-207ENST00000511409 M0QZ24 198 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 OGG1O15527 345 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 PLRG1O43660 514 aaKnown RBP3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 BEST1O76090 585 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 HIST1H2ABP04908 130 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 HSP90AA1P07900 732 aaKnown RBP3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 ACAA1P09110 424 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 HIST1H2ADP20671 130 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 UBA1P22314 1058 aaKnown RBP3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 RRM1P23921 792 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms