RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.87□□□□□ -1.31
USP53-206ENST00000510737 TM6SF1Q9BZW5 370 aa6.87□□□□□ -1.31
USP53-206ENST00000510737 EPS8L2Q9H6S3 715 aa6.87□□□□□ -1.31
USP53-206ENST00000510737 ADD3Q9UEY8 706 aaKnown RBP6.87□□□□□ -1.31
USP53-206ENST00000510737 DBNLQ9UJU6 430 aaKnown RBP6.87□□□□□ -1.31
USP53-206ENST00000510737 MICAL3Q7RTP6 2002 aa6.87□□□□□ -1.31
USP53-206ENST00000510737 WDFY3Q8IZQ1 3526 aa6.87□□□□□ -1.31
USP53-206ENST00000510737 CKAP5Q14008 2032 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 NLRC5Q86WI3 1866 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 ZNF532Q9HCE3 1301 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 LOC102724159A0A0B4J2E5 919 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 IGKV6D-41A0A0C4DH26 115 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 MSI1O43347 362 aaKnown RBP6.86□□□□□ -1.31
USP53-206ENST00000510737 HOXD3P31249 432 aaPredicted RBP6.86□□□□□ -1.31
USP53-206ENST00000510737 ART1P52961 327 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 FAM3BP58499 235 aaPredicted RBP6.86□□□□□ -1.31
USP53-206ENST00000510737 RPL15P61313 204 aaKnown RBP6.86□□□□□ -1.31
USP53-206ENST00000510737 PWP2Q15269 919 aaKnown RBP6.86□□□□□ -1.31
USP53-206ENST00000510737 SLC35G1Q2M3R5 365 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 ARL13BQ3SXY8 428 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 ARL13AQ5H913 290 aaPredicted RBP6.86□□□□□ -1.31
USP53-206ENST00000510737 FNBP1LQ5T0N5 605 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 ANKRD40Q6AI12 368 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 CTR9Q6PD62 1173 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 TMED8Q6PL24 325 aaPredicted RBP6.86□□□□□ -1.31
USP53-206ENST00000510737 CHST3Q7LGC8 479 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 DGKHQ86XP1 1220 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 TXLNBQ8N3L3 684 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 SLC25A41Q8N5S1 370 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 FRMD8Q9BZ67 464 aaPredicted RBP6.86□□□□□ -1.31
USP53-206ENST00000510737 PNRC2Q9NPJ4 139 aaKnown RBP6.86□□□□□ -1.31
USP53-206ENST00000510737 ATP8A2Q9NTI2 1148 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 DLGAP2Q9P1A6 1054 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 ANGPTL2Q9UKU9 493 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 MYO10Q9HD67 2058 aa6.86□□□□□ -1.31
USP53-206ENST00000510737 RALGAPA2Q2PPJ7 1873 aa6.85□□□□□ -1.31
USP53-206ENST00000510737 KCNJ18B7U540 433 aa6.85□□□□□ -1.31
USP53-206ENST00000510737 DCNP07585 359 aaKnown RBP6.85□□□□□ -1.31
USP53-206ENST00000510737 WEE2P0C1S8 567 aa6.85□□□□□ -1.31
USP53-206ENST00000510737 PKMP14618 531 aaKnown RBP6.85□□□□□ -1.31
USP53-206ENST00000510737 HOXB8P17481 243 aaPredicted RBP6.85□□□□□ -1.31
USP53-206ENST00000510737 ERVFC1-1P60608 527 aa6.85□□□□□ -1.31
USP53-206ENST00000510737 KIF5AQ12840 1032 aa6.85□□□□□ -1.31
USP53-206ENST00000510737 N4BP2L1Q5TBK1 243 aaPredicted RBP6.85□□□□□ -1.31
USP53-206ENST00000510737 DCAF12L2Q5VW00 463 aa6.85□□□□□ -1.31
USP53-206ENST00000510737 Q6ZSV7 163 aa6.85□□□□□ -1.31
USP53-206ENST00000510737 C16orf82Q7Z2V1 217 aa6.85□□□□□ -1.31
USP53-206ENST00000510737 ADPRHL1Q8NDY3 354 aa6.85□□□□□ -1.31
USP53-206ENST00000510737 GMCL1P1Q8NEA9 526 aa6.85□□□□□ -1.31
USP53-206ENST00000510737 CHURC1Q8WUH1 139 aa6.85□□□□□ -1.31
USP53-206ENST00000510737 APBB2Q92870 758 aa6.85□□□□□ -1.31
USP53-206ENST00000510737 TTC17Q96AE7 1141 aa6.85□□□□□ -1.31
USP53-206ENST00000510737 CDCA3Q99618 268 aaPredicted RBP6.85□□□□□ -1.31
USP53-206ENST00000510737 TNFSF13BQ9Y275 285 aa6.85□□□□□ -1.31
USP53-206ENST00000510737 NAV1Q8NEY1 1877 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 SLC30A4O14863 429 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 KINO60870 393 aaKnown RBP6.84□□□□□ -1.31
USP53-206ENST00000510737 GH1P01241 217 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 ZNF286BP0CG31 522 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 CALML3P27482 149 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 TNFSF8P32971 234 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 STAT2P52630 851 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 TLE3Q04726 772 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 ZBTB16Q05516 673 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 TDGQ13569 410 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 KRTAP24-1Q3LI83 254 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 FAM76BQ5HYJ3 339 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 SPECC1Q5M775 1068 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 C9orf57Q5W0N0 161 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 ATP6V0A1Q93050 837 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 RAB21Q9UL25 225 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 CCPG1Q9ULG6 757 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 FZD10Q9ULW2 581 aa6.84□□□□□ -1.31
USP53-206ENST00000510737 LOC400499M0QZD8 3231 aa6.84□□□□□ -1.32
USP53-206ENST00000510737 TRBV5-7A0A0A0MS05 114 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 SMTNL1A8MU46 457 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 HIDE1A8MVS5 230 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 PLA2G6O60733 806 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 CHRNA1P02708 482 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 ALDOAP04075 364 aaKnown RBP6.83□□□□□ -1.32
USP53-206ENST00000510737 ICAM1P05362 532 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 GLULP15104 373 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 CHRNB2P17787 502 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 MCCP23508 829 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 HOXC8P31273 242 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 KRTAP10-5P60370 271 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 ALG10Q5BKT4 473 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 ALG10BQ5I7T1 473 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 CES5AQ6NT32 575 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 SEPT14Q6ZU15 432 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 FAM160B2Q86V87 743 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 FAM217AQ8IXS0 508 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 NECTIN4Q96NY8 510 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 KATNAL1Q9BW62 490 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 CA14Q9ULX7 337 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 ICAM5Q9UMF0 924 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 DUSP12Q9UNI6 340 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 SLC12A4Q9UP95 1085 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 DTX4Q9Y2E6 619 aa6.83□□□□□ -1.32
USP53-206ENST00000510737 SMG1Q96Q15 3661 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms