RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 MMGT1Q8N4V1 131 aa10.29□□□□□ -0.76
PFDN1-203ENST00000510217 ARL10Q8N8L6 244 aa10.29□□□□□ -0.76
PFDN1-203ENST00000510217 ATL2Q8NHH9 583 aa10.29□□□□□ -0.76
PFDN1-203ENST00000510217 ARRDC2Q8TBH0 407 aa10.29□□□□□ -0.76
PFDN1-203ENST00000510217 NAT6Q93015 286 aa10.29□□□□□ -0.76
PFDN1-203ENST00000510217 SCRN2Q96FV2 425 aa10.29□□□□□ -0.76
PFDN1-203ENST00000510217 TSGA13Q96PP4 275 aa10.29□□□□□ -0.76
PFDN1-203ENST00000510217 RNF157Q96PX1 679 aa10.29□□□□□ -0.76
PFDN1-203ENST00000510217 DEPDC7Q96QD5 511 aa10.29□□□□□ -0.76
PFDN1-203ENST00000510217 SMIM14Q96QK8 99 aa10.29□□□□□ -0.76
PFDN1-203ENST00000510217 RBM15Q96T37 977 aaKnown RBP eCLIP10.29□□□□□ -0.761e-6■■■■□ 21.5
PFDN1-203ENST00000510217 RHOXF2Q9BQY4 288 aa10.29□□□□□ -0.76
PFDN1-203ENST00000510217 TDRD1Q9BXT4 1180 aaKnown RBP10.29□□□□□ -0.76
PFDN1-203ENST00000510217 MRPL40Q9NQ50 206 aaKnown RBP10.29□□□□□ -0.76
PFDN1-203ENST00000510217 SIRPGQ9P1W8 387 aa10.29□□□□□ -0.76
PFDN1-203ENST00000510217 RNF14Q9UBS8 474 aa10.29□□□□□ -0.76
PFDN1-203ENST00000510217 LHX6Q9UPM6 363 aa10.29□□□□□ -0.76
PFDN1-203ENST00000510217 RAI2Q9Y5P3 530 aa10.29□□□□□ -0.76
PFDN1-203ENST00000510217 AK5Q9Y6K8 562 aa10.29□□□□□ -0.76
PFDN1-203ENST00000510217 CAPN6Q9Y6Q1 641 aa10.29□□□□□ -0.76
PFDN1-203ENST00000510217 PRSS38A1L453 326 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 CCDC66A2RUB6 948 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 CAPN8A6NHC0 703 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 TNFRSF10CO14798 259 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 SOD1P00441 154 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 PRLP01236 227 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 TNFP01375 233 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 KRT1P04264 644 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 CTSEP14091 401 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 CCNB1P14635 433 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 MX2P20592 715 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 NFKBIAP25963 317 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 RPIAP49247 311 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 PDX1P52945 283 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 FOXK1P85037 733 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 PPIDQ08752 370 aaKnown RBP10.28□□□□□ -0.76
PFDN1-203ENST00000510217 ITKQ08881 620 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 NIPAL4Q0D2K0 466 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 ZBTB17Q13105 803 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 TCEAL1Q15170 157 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 COL28A1Q2UY09 1125 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 ZFYVE27Q5T4F4 411 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 LRRC66Q68CR7 880 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 SLC9A4Q6AI14 798 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 LVRNQ6Q4G3 990 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 RFLNAQ6ZTI6 216 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 TECPR1Q7Z6L1 1165 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 HEATR4Q86WZ0 1026 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 GKN2Q86XP6 184 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 CCDC13Q8IYE1 715 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 SDR16C5Q8N3Y7 309 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.28□□□□□ -0.76
PFDN1-203ENST00000510217 SNIP1Q8TAD8 396 aaKnown RBP10.28□□□□□ -0.76
PFDN1-203ENST00000510217 GLMNQ92990 594 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 LGMNQ99538 433 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 CCDC3Q9BQI4 270 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 TEX101Q9BY14 249 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 FRMD8Q9BZ67 464 aaPredicted RBP10.28□□□□□ -0.76
PFDN1-203ENST00000510217 MED4Q9NPJ6 270 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 RBM22Q9NW64 420 aaKnown RBP eCLIP10.28□□□□□ -0.76
PFDN1-203ENST00000510217 PSD3Q9NYI0 1048 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 AMACRQ9UHK6 382 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 RABGEF1Q9UJ41 708 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 INTUQ9ULD6 942 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 PADI4Q9UM07 663 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 GPR34Q9UPC5 381 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 DOLKQ9UPQ8 538 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 TTLL3Q9Y4R7 772 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 CHD6Q8TD26 2715 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 ITPR1Q14643 2758 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 SCN8AQ9UQD0 1980 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 ANKRD11Q6UB99 2663 aaPredicted RBP10.28□□□□□ -0.76
PFDN1-203ENST00000510217 RP1P56715 2156 aa10.28□□□□□ -0.76
PFDN1-203ENST00000510217 ASXL3Q9C0F0 2248 aa10.27□□□□□ -0.76
PFDN1-203ENST00000510217 DSPP15924 2871 aaKnown RBP10.27□□□□□ -0.77
PFDN1-203ENST00000510217 A0A0J9YYE9 177 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 A0A1W2PNU3 283 aaPredicted RBP10.27□□□□□ -0.77
PFDN1-203ENST00000510217 KCNK1O00180 336 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 CES2O00748 559 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 APOL1O14791 398 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 GPR37O15354 613 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 USP12O75317 370 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 TRBC1P01850 177 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 MPOP05164 745 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 MMP2P08253 660 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 ZNF30P17039 623 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 KELP23276 732 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 TEAD1P28347 426 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 TNFRSF8P28908 595 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 GABREP78334 506 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 IFI35P80217 286 aaPredicted RBP10.27□□□□□ -0.77
PFDN1-203ENST00000510217 CDK3Q00526 305 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 ARHGEF7Q14155 803 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 CASP8Q14790 479 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 ISXQ2M1V0 245 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 TBC1D25Q3MII6 688 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 FAM182AQ5T1J6 154 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 LRRC38Q5VT99 294 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 RAET1GQ6H3X3 334 aa10.27□□□□□ -0.77
PFDN1-203ENST00000510217 NPNTQ6UXI9 565 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms