RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 OR6C4Q8NGE1 309 aa21.14■□□□□ 0.97
LIN54-208ENST00000509748 MAK16Q9BXY0 300 aaKnown RBP21.14■□□□□ 0.97
LIN54-208ENST00000509748 HAUS2Q9NVX0 235 aa21.14■□□□□ 0.97
LIN54-208ENST00000509748 TRNAU1APQ9NX07 287 aaKnown RBP21.14■□□□□ 0.97
LIN54-208ENST00000509748 DDX56Q9NY93 547 aaKnown RBP21.14■□□□□ 0.97
LIN54-208ENST00000509748 APPL1Q9UKG1 709 aa21.14■□□□□ 0.97
LIN54-208ENST00000509748 ATRXP46100 2492 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 GOLGA6CA6NDK9 693 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 GOLGA6BA6NDN3 693 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 FGF1P05230 155 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 IVLP07476 585 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 GOLGA6DP0CG33 693 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 GLB1P16278 677 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 ZFXP17010 805 aaPredicted RBP21.13■□□□□ 0.97
LIN54-208ENST00000509748 CDKN2BP42772 138 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 ABCG1P45844 678 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 SPIDRQ14159 915 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 PDK1Q15118 436 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 C14orf28Q4W4Y0 310 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 C3orf38Q5JPI3 329 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 B4GALNT4Q76KP1 1039 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 B3GNT8Q7Z7M8 397 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 RFX6Q8HWS3 928 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 RAVER1Q8IY67 606 aaKnown RBP21.13■□□□□ 0.97
LIN54-208ENST00000509748 NRSN1Q8IZ57 195 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.13■□□□□ 0.97
LIN54-208ENST00000509748 TADA1Q96BN2 335 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 COX14Q96I36 57 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 SLC46A1Q96NT5 459 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 TRIB3Q96RU7 358 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 RIOK2Q9BVS4 552 aaKnown RBP21.13■□□□□ 0.97
LIN54-208ENST00000509748 CEP41Q9BYV8 373 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 LRRN3Q9H3W5 708 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 GOLPH3Q9H4A6 298 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 GOLGA6AQ9NYA3 693 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 TFR2Q9UP52 801 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 TMEM98Q9Y2Y6 226 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 ALG6Q9Y672 507 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 RNF215Q9Y6U7 377 aa21.13■□□□□ 0.97
LIN54-208ENST00000509748 B4DGG1 531 aa21.12■□□□□ 0.97
LIN54-208ENST00000509748 ANKRD66B4E2M5 251 aa21.12■□□□□ 0.97
LIN54-208ENST00000509748 RPLP0P05388 317 aaKnown RBP21.12■□□□□ 0.97
LIN54-208ENST00000509748 TNNT1P13805 278 aa21.12■□□□□ 0.97
LIN54-208ENST00000509748 PNLIPP16233 465 aa21.12■□□□□ 0.97
LIN54-208ENST00000509748 CA4P22748 312 aa21.12■□□□□ 0.97
LIN54-208ENST00000509748 AK4P27144 223 aaPredicted RBP21.12■□□□□ 0.97
LIN54-208ENST00000509748 ADCY8P40145 1251 aa21.12■□□□□ 0.97
LIN54-208ENST00000509748 GNPDA1P46926 289 aa21.12■□□□□ 0.97
LIN54-208ENST00000509748 ERVPABLB-1P60509 514 aa21.12■□□□□ 0.97
LIN54-208ENST00000509748 AP1B1Q10567 949 aa21.12■□□□□ 0.97
LIN54-208ENST00000509748 TRIM74Q86UV6 250 aa21.12■□□□□ 0.97
LIN54-208ENST00000509748 EID2BQ96D98 161 aa21.12■□□□□ 0.97
LIN54-208ENST00000509748 IMP4Q96G21 291 aaKnown RBP21.12■□□□□ 0.97
LIN54-208ENST00000509748 DPEP2Q9H4A9 486 aa21.12■□□□□ 0.97
LIN54-208ENST00000509748 SUDS3Q9H7L9 328 aaPredicted RBP21.12■□□□□ 0.97
LIN54-208ENST00000509748 TAAR2Q9P1P5 351 aa21.12■□□□□ 0.97
LIN54-208ENST00000509748 DNPEPQ9ULA0 475 aa21.12■□□□□ 0.97
LIN54-208ENST00000509748 CNOT6Q9ULM6 557 aaKnown RBP21.12■□□□□ 0.97
LIN54-208ENST00000509748 PLEKHM1Q9Y4G2 1056 aa21.12■□□□□ 0.97
LIN54-208ENST00000509748 PCDHGA8Q9Y5G5 932 aa21.12■□□□□ 0.97
LIN54-208ENST00000509748 MGAQ8IWI9 3026 aa21.11■□□□□ 0.97
LIN54-208ENST00000509748 D6RAR5 112 aa21.11■□□□□ 0.97
LIN54-208ENST00000509748 RRP8O43159 456 aaKnown RBP21.11■□□□□ 0.97
LIN54-208ENST00000509748 SPOPO43791 374 aa21.11■□□□□ 0.97
LIN54-208ENST00000509748 NOP2P46087 812 aaKnown RBP21.11■□□□□ 0.97
LIN54-208ENST00000509748 DYNLT1P63172 113 aa21.11■□□□□ 0.97
LIN54-208ENST00000509748 CTBSQ01459 385 aa21.11■□□□□ 0.97
LIN54-208ENST00000509748 ADCY2Q08462 1091 aa21.11■□□□□ 0.97
LIN54-208ENST00000509748 CCDC173Q0VFZ6 552 aa21.11■□□□□ 0.97
LIN54-208ENST00000509748 LRRC69Q6ZNQ3 347 aa21.11■□□□□ 0.97
LIN54-208ENST00000509748 GFM1Q96RP9 751 aaKnown RBP21.11■□□□□ 0.97
LIN54-208ENST00000509748 MLPHQ9BV36 600 aaPredicted RBP21.11■□□□□ 0.97
LIN54-208ENST00000509748 GSDMCQ9BYG8 508 aa21.11■□□□□ 0.97
LIN54-208ENST00000509748 BRD8Q9H0E9 1235 aa21.11■□□□□ 0.97
LIN54-208ENST00000509748 PRORYQ9H606 182 aa21.11■□□□□ 0.97
LIN54-208ENST00000509748 SYNDIG1Q9H7V2 258 aa21.11■□□□□ 0.97
LIN54-208ENST00000509748 LRIT1Q9P2V4 623 aa21.11■□□□□ 0.97
LIN54-208ENST00000509748 SAE1Q9UBE0 346 aaPredicted RBP21.11■□□□□ 0.97
LIN54-208ENST00000509748 PCDHA13Q9Y5I0 950 aa21.11■□□□□ 0.97
LIN54-208ENST00000509748 ZFC3H1O60293 1989 aaKnown RBP21.1■□□□□ 0.97
LIN54-208ENST00000509748 PSTPIP1O43586 416 aa21.1■□□□□ 0.97
LIN54-208ENST00000509748 NUDT21O43809 227 aaKnown RBP21.1■□□□□ 0.97
LIN54-208ENST00000509748 SPINT3P49223 89 aa21.1■□□□□ 0.97
LIN54-208ENST00000509748 B4GALNT1Q00973 533 aa21.1■□□□□ 0.97
LIN54-208ENST00000509748 TLE3Q04726 772 aa21.1■□□□□ 0.97
LIN54-208ENST00000509748 ILF3Q12906 894 aaKnown RBP eCLIP21.1■□□□□ 0.974e-6■■■■□ 19.3
LIN54-208ENST00000509748 PRKD1Q15139 912 aaPredicted RBP21.1■□□□□ 0.97
LIN54-208ENST00000509748 SOWAHCQ53LP3 525 aaPredicted RBP21.1■□□□□ 0.97
LIN54-208ENST00000509748 DOK6Q6PKX4 331 aa21.1■□□□□ 0.97
LIN54-208ENST00000509748 SPOCD1Q6ZMY3 1216 aa21.1■□□□□ 0.97
LIN54-208ENST00000509748 SPRED1Q7Z699 444 aa21.1■□□□□ 0.97
LIN54-208ENST00000509748 CCNJLQ8IV13 435 aa21.1■□□□□ 0.97
LIN54-208ENST00000509748 SPACA3Q8IXA5 215 aa21.1■□□□□ 0.97
LIN54-208ENST00000509748 CCDC170Q8IYT3 715 aa21.1■□□□□ 0.97
LIN54-208ENST00000509748 Q8N9G6 341 aaPredicted RBP21.1■□□□□ 0.97
LIN54-208ENST00000509748 WDR36Q8NI36 951 aaKnown RBP21.1■□□□□ 0.97
LIN54-208ENST00000509748 LIN37Q96GY3 246 aaPredicted RBP21.1■□□□□ 0.97
LIN54-208ENST00000509748 AGAP3Q96P47 875 aa21.1■□□□□ 0.97
LIN54-208ENST00000509748 RBSNQ9H1K0 784 aa21.1■□□□□ 0.97
LIN54-208ENST00000509748 SLC25A51Q9H1U9 297 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms