RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 B4DGG1 531 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 ZW10O43264 779 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 CLDN7O95471 211 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 PRLP01236 227 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 CEACAM5P06731 702 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 MMP2P08253 660 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 SLC14A2Q15849 920 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 PCSK7Q16549 785 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 TAZQ16635 292 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 QPCTQ16769 361 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 ISXQ2M1V0 245 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 TEX44Q53QW1 395 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 DOK6Q6PKX4 331 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 SCAMP4Q969E2 229 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 CCDC74AQ96AQ1 378 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 HIC2Q96JB3 615 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 DCBLD2Q96PD2 775 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 GOLPH3Q9H4A6 298 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 RAD18Q9NS91 495 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 SUFUQ9UMX1 484 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 PCDHB1Q9Y5F3 818 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 APC2O95996 2303 aa18.58■□□□□ 0.56
UBE3D-207ENST00000509102 LRP4O75096 1905 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 BRINP1O60477 761 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 IVLP07476 585 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 GLB1P16278 677 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 COPS2P61201 443 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 GABREP78334 506 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 CDK18Q07002 472 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 GALNT3Q14435 633 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 PRKD1Q15139 912 aaPredicted RBP18.57■□□□□ 0.56
UBE3D-207ENST00000509102 PPP2R5EQ16537 467 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 C14orf28Q4W4Y0 310 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 KCTD16Q68DU8 428 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 NYAP1Q6ZVC0 841 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 KIAA1328Q86T90 577 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 GPR156Q8NFN8 814 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 GPBAR1Q8TDU6 330 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 GFM1Q96RP9 751 aaKnown RBP18.57■□□□□ 0.56
UBE3D-207ENST00000509102 VAT1Q99536 393 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 BAG1Q99933 345 aaPredicted RBP18.57■□□□□ 0.56
UBE3D-207ENST00000509102 RIOK2Q9BVS4 552 aaKnown RBP18.57■□□□□ 0.56
UBE3D-207ENST00000509102 FAM83DQ9H4H8 585 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 ZFYVE1Q9HBF4 777 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 GLOD4Q9HC38 313 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 TFR2Q9UP52 801 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 SLC17A4Q9Y2C5 497 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 GPSM3Q9Y4H4 160 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 MYLKQ15746 1914 aa18.57■□□□□ 0.56
UBE3D-207ENST00000509102 hCG_1818297A0A087WSY0 165 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 A0A0U1RQS6 177 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 HACD1B0YJ81 288 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 TMX2-CTNND1H3BSU7 103 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 ASMTLO95671 621 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 FECHP22830 423 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 CTNNA2P26232 953 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 LSSP48449 732 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 SPINT3P49223 89 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 IHHQ14623 411 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 LLGL1Q15334 1064 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 OGFOD3Q6PK18 319 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 KDELC2Q7Z4H8 507 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 ZC3H18Q86VM9 953 aaKnown RBP18.56■□□□□ 0.56
UBE3D-207ENST00000509102 GALNT13Q8IUC8 556 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 FGF11Q92914 225 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 TEKT5Q96M29 485 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 SMIM14Q96QK8 99 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 OR2M4Q96R27 311 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 POLR1BQ9H9Y6 1135 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 KLHL8Q9P2G9 620 aaPredicted RBP18.56■□□□□ 0.56
UBE3D-207ENST00000509102 SAE1Q9UBE0 346 aaPredicted RBP18.56■□□□□ 0.56
UBE3D-207ENST00000509102 LHX6Q9UPM6 363 aa18.56■□□□□ 0.56
UBE3D-207ENST00000509102 DSPP15924 2871 aaKnown RBP18.55■□□□□ 0.56
UBE3D-207ENST00000509102 A0A087WV48 116 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 CCDC66A2RUB6 948 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 BTNL10A8MVZ5 291 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 INPP4BO15327 924 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 NUDT21O43809 227 aaKnown RBP18.55■□□□□ 0.56
UBE3D-207ENST00000509102 MPOP05164 745 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 RPLP0P05388 317 aaKnown RBP18.55■□□□□ 0.56
UBE3D-207ENST00000509102 PNLIPP16233 465 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 PECAM1P16284 738 aaPredicted RBP18.55■□□□□ 0.56
UBE3D-207ENST00000509102 PTPN3P26045 913 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 RBMS1P29558 406 aaKnown RBP18.55■□□□□ 0.56
UBE3D-207ENST00000509102 CTNNA1P35221 906 aaKnown RBP18.55■□□□□ 0.56
UBE3D-207ENST00000509102 VAV2P52735 878 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 LRP8Q14114 963 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 TBC1D25Q3MII6 688 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 CERCAMQ5T4B2 595 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 SLC30A9Q6PML9 568 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 RFLNAQ6ZTI6 216 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 ZDHHC1Q8WTX9 485 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 ZNF578Q96N58 590 aaPredicted RBP18.55■□□□□ 0.56
UBE3D-207ENST00000509102 GPR63Q9BZJ6 419 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 STRADBQ9C0K7 418 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 MAGEE1Q9HCI5 957 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 LRIT1Q9P2V4 623 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 IMPACTQ9P2X3 320 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 CFAP47Q6ZTR5 3102 aa18.55■□□□□ 0.56
UBE3D-207ENST00000509102 CHD6Q8TD26 2715 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms