RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 TM9SF3Q9HD45 589 aa3.85□□□□□ -1.79
HMGN1P11-201ENST00000508668 UBE2TQ9NPD8 197 aaPredicted RBP3.85□□□□□ -1.79
HMGN1P11-201ENST00000508668 DDIT4Q9NX09 232 aa3.85□□□□□ -1.79
HMGN1P11-201ENST00000508668 DONSONQ9NYP3 566 aa3.85□□□□□ -1.79
HMGN1P11-201ENST00000508668 USP36Q9P275 1121 aaKnown RBP3.85□□□□□ -1.79
HMGN1P11-201ENST00000508668 Q9UFV3 132 aa3.85□□□□□ -1.79
HMGN1P11-201ENST00000508668 FBXO10Q9UK96 956 aa3.85□□□□□ -1.79
HMGN1P11-201ENST00000508668 DMTF1Q9Y222 760 aa3.85□□□□□ -1.79
HMGN1P11-201ENST00000508668 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.85□□□□□ -1.79
HMGN1P11-201ENST00000508668 ITIH6Q6UXX5 1313 aa3.85□□□□□ -1.79
HMGN1P11-201ENST00000508668 ANK1P16157 1881 aa3.85□□□□□ -1.79
HMGN1P11-201ENST00000508668 CHD8Q9HCK8 2581 aa3.85□□□□□ -1.79
HMGN1P11-201ENST00000508668 ATG2BQ96BY7 2078 aa3.85□□□□□ -1.79
HMGN1P11-201ENST00000508668 COL4A2P08572 1712 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 CEP295Q9C0D2 2601 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 HELZP42694 1942 aaKnown RBP3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 hCG_2014768A0A024R1R8 64 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 A0A1B0GVM2 712 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 A0A1W2PPC4 97 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 TRABD2BA6NFA1 517 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 C9orf118A6NHY6 69 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 YJEFN3A6XGL0 299 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 KCNU1A8MYU2 1149 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 E7ENQ6 273 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 PRAMEF26H0Y7S4 382 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 TLR4O00206 839 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 O00370 1275 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 MID1O15344 667 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 SLC7A4O43246 635 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 PCDHGA12O60330 932 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 NOBOXO60393 691 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 HSF2BPO75031 334 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 CLDN11O75508 207 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 PRKD3O94806 890 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 ADCY5O95622 1261 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 TRUB2O95900 331 aaKnown RBP3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 KLKB1P03952 638 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 RHOCP08134 193 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 CCDC172P0C7W6 258 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 ZNF888P0CJ79 500 aaPredicted RBP3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 CD59P13987 128 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 PDGFRAP16234 1089 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 TACR2P21452 398 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 NFKBIAP25963 317 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 HOXD9P28356 352 aaPredicted RBP3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 HLA-FP30511 346 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 MAT2AP31153 395 aaKnown RBP3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 CD70P32970 193 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 ACSL1P33121 698 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 CCR5P51681 352 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 UCNP55089 124 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 DAOAP59103 153 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 RNASE9P60153 205 aaKnown RBP3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 RPS14P62263 151 aaKnown RBP3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 GCNT1Q02742 428 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 DEUP1Q05D60 604 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 RAPGEF1Q13905 1077 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 PTK2BQ14289 1009 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 MS4A13Q5J8X5 152 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 RAB41Q5JT25 222 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 FKBP15Q5T1M5 1219 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 RAP1GAP2Q684P5 730 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 TMEM200BQ69YZ2 307 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 ANKRD40Q6AI12 368 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 NAPEPLDQ6IQ20 393 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 NCEH1Q6PIU2 408 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 DHRS13Q6UX07 377 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 CCNI2Q6ZMN8 369 aaPredicted RBP3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 GLRX5Q86SX6 157 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 CXorf67Q86X51 503 aaPredicted RBP3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 ZDHHC17Q8IUH5 632 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 KLHL36Q8N4N3 616 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 TMEM35BQ8NCS4 154 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 OR5AN1Q8NGI8 311 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 ARHGEF26Q96DR7 871 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 PIWIL1Q96J94 861 aaKnown RBP3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 PPP1R13BQ96KQ4 1090 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 TIGD1Q96MW7 591 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 KCNC2Q96PR1 638 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 NCAPGQ9BPX3 1015 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 CALN1Q9BXU9 219 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 SIK2Q9H0K1 926 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 RSPH9Q9H1X1 276 aaPredicted RBP3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 MTG2Q9H4K7 406 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 C6orf106Q9H6K1 298 aaPredicted RBP3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 WDCPQ9H6R7 721 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 APOBEC3GQ9HC16 384 aaKnown RBP3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 PRSS16Q9NQE7 514 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 TMEM30AQ9NV96 361 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 SEPT11Q9NVA2 429 aaKnown RBP3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 HAUS2Q9NVX0 235 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 OSER1Q9NX31 292 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 RRN3Q9NYV6 651 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 AKAP7Q9P0M2 348 aaPredicted RBP3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 CLCA2Q9UQC9 943 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 HPSEQ9Y251 543 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 PCDHGA1Q9Y5H4 931 aa3.84□□□□□ -1.79
HMGN1P11-201ENST00000508668 FRYLO94915 3013 aa3.83□□□□□ -1.8
HMGN1P11-201ENST00000508668 A0A1B0GTQ1 180 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms