RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 AIF1P55008 147 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 GSCP56915 257 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-211ENST00000508546 ACTR1AP61163 376 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 MAN2A1Q16706 1144 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 C16orf46Q6P387 395 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 ASB18Q6ZVZ8 466 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 KDELC2Q7Z4H8 507 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 CBARPQ8N350 705 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-211ENST00000508546 ESX1Q8N693 406 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 OR10G6Q8NH81 332 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 AHCYL2Q96HN2 611 aaKnown RBP9.36□□□□□ -0.91
NEDD9-211ENST00000508546 GBP4Q96PP9 640 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 NAA15Q9BXJ9 866 aaKnown RBP9.36□□□□□ -0.91
NEDD9-211ENST00000508546 SUDS3Q9H7L9 328 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-211ENST00000508546 VPS4AQ9UN37 437 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 PCDHB3Q9Y5E6 796 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 FHOD1Q9Y613 1164 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 RPS6KL1Q9Y6S9 549 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 A0A1B0GTL3 188 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 A0A1W2PQ67 120 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 ARHGAP42A6NI28 874 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 CREB3O43889 395 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 PALMO75781 387 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 RECKO95980 971 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 KRT3P12035 628 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 PRF1P14222 555 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 GPD1P21695 349 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 F8A1P23610 371 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 RFC1P35251 1148 aaPredicted RBP9.35□□□□□ -0.91
NEDD9-211ENST00000508546 NOP2P46087 812 aaKnown RBP9.35□□□□□ -0.91
NEDD9-211ENST00000508546 RFTN1Q14699 578 aaPredicted RBP9.35□□□□□ -0.91
NEDD9-211ENST00000508546 CNGA3Q16281 694 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.35□□□□□ -0.91
NEDD9-211ENST00000508546 ATP1A1-AS1Q5TC04 95 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 KLHDC7AQ5VTJ3 777 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 WDR59Q6PJI9 974 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 PHLDB2Q86SQ0 1253 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 SFRP1Q8N474 314 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 EFCAB3Q8N7B9 438 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 SLC37A2Q8TED4 501 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 PTCD2Q8WV60 388 aaKnown RBP9.35□□□□□ -0.91
NEDD9-211ENST00000508546 MOCOSQ96EN8 888 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 DTD2Q96FN9 168 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 OR2M4Q96R27 311 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 SLC38A3Q99624 504 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 CTRCQ99895 268 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 ZMYND15Q9H091 742 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 NDST4Q9H3R1 872 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 APMAPQ9HDC9 416 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 B4GALT6Q9UBX8 382 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 NOCTQ9UK39 431 aaKnown RBP9.35□□□□□ -0.91
NEDD9-211ENST00000508546 FZD10Q9ULW2 581 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 POLHQ9Y253 713 aa9.35□□□□□ -0.91
NEDD9-211ENST00000508546 A8MU76 341 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 A8MX80 341 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 F8VZ95 297 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 PSMD11O00231 422 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 POLR1CO15160 346 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-211ENST00000508546 HTRA2O43464 458 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-211ENST00000508546 RFPL1O75677 317 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 HEXIM1O94992 359 aaKnown RBP9.34□□□□□ -0.91
NEDD9-211ENST00000508546 DDAH2O95865 285 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 UCHL3P15374 230 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 NFKBIAP25963 317 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 VIPR1P32241 457 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 POLD2P49005 469 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 PAPOLAP51003 745 aaKnown RBP9.34□□□□□ -0.91
NEDD9-211ENST00000508546 PMS2P54278 862 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 AP1S1P61966 158 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 FMO1Q01740 532 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 CDR2Q01850 454 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 DPTQ07507 201 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 PTP4A2Q12974 167 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 LRP8Q14114 963 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 MIIPQ5JXC2 388 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 SNAP47Q5SQN1 464 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 TRIM72Q6ZMU5 477 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 ZNF761Q86XN6 746 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-211ENST00000508546 APLFQ8IW19 511 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-211ENST00000508546 PAF1Q8N7H5 531 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 SLC20A1Q8WUM9 679 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 NSMCE3Q96MG7 304 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 C11orf70Q9BRQ4 267 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 ANP32EQ9BTT0 268 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 CINPQ9BW66 212 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-211ENST00000508546 STK33Q9BYT3 514 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 SLC39A8Q9C0K1 460 aa9.34□□□□□ -0.91
NEDD9-211ENST00000508546 SARS2Q9NP81 518 aaKnown RBP9.34□□□□□ -0.91
NEDD9-211ENST00000508546 SIDT1Q9NXL6 827 aaKnown RBP9.34□□□□□ -0.91
NEDD9-211ENST00000508546 MRPS18BQ9Y676 258 aaKnown RBP9.34□□□□□ -0.91
NEDD9-211ENST00000508546 SEC16AO15027 2179 aa9.33□□□□□ -0.92
NEDD9-211ENST00000508546 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.33□□□□□ -0.92
NEDD9-211ENST00000508546 SIGLEC16A6NMB1 481 aa9.33□□□□□ -0.92
NEDD9-211ENST00000508546 TTLL8A6PVC2 850 aa9.33□□□□□ -0.92
NEDD9-211ENST00000508546 CCP110O43303 1012 aa9.33□□□□□ -0.92
NEDD9-211ENST00000508546 SOCS5O75159 536 aa9.33□□□□□ -0.92
NEDD9-211ENST00000508546 FURINP09958 794 aa9.33□□□□□ -0.92
NEDD9-211ENST00000508546 ANKRD34CP0C6C1 535 aa9.33□□□□□ -0.92
NEDD9-211ENST00000508546 CYP2A6P11509 494 aaPredicted RBP9.33□□□□□ -0.92
NEDD9-211ENST00000508546 UNGP13051 313 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms