RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 KATNAL2Q8IYT4 538 aa12.09□□□□□ -0.47
CLDND1-218ENST00000508503 RCOR2Q8IZ40 523 aa12.09□□□□□ -0.47
CLDND1-218ENST00000508503 KYQ8NBH2 561 aa12.09□□□□□ -0.47
CLDND1-218ENST00000508503 FAM46DQ8NEK8 389 aa12.09□□□□□ -0.47
CLDND1-218ENST00000508503 CCL4L1Q8NHW4 92 aa12.09□□□□□ -0.47
CLDND1-218ENST00000508503 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.09□□□□□ -0.47
CLDND1-218ENST00000508503 SCAMP4Q969E2 229 aa12.09□□□□□ -0.47
CLDND1-218ENST00000508503 AP2M1Q96CW1 435 aa12.09□□□□□ -0.47
CLDND1-218ENST00000508503 HIC2Q96JB3 615 aa12.09□□□□□ -0.47
CLDND1-218ENST00000508503 TEKT5Q96M29 485 aa12.09□□□□□ -0.47
CLDND1-218ENST00000508503 MLPHQ9BV36 600 aaPredicted RBP12.09□□□□□ -0.47
CLDND1-218ENST00000508503 SPATS2LQ9NUQ6 558 aaKnown RBP12.09□□□□□ -0.47
CLDND1-218ENST00000508503 CNOT6Q9ULM6 557 aaKnown RBP12.09□□□□□ -0.47
CLDND1-218ENST00000508503 LHX6Q9UPM6 363 aa12.09□□□□□ -0.47
CLDND1-218ENST00000508503 CACNA1GO43497 2377 aa12.08□□□□□ -0.47
CLDND1-218ENST00000508503 ATMQ13315 3056 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 A0A1W2PQM1 296 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 RCCD1A6NED2 376 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 BTNL10A8MVZ5 291 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 PPP1R12AO14974 1030 aaPredicted RBP12.08□□□□□ -0.48
CLDND1-218ENST00000508503 SPOPO43791 374 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 ZRANB2O95218 330 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLDND1-218ENST00000508503 FGF1P05230 155 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 ACTN2P35609 894 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 CYLC1P35663 651 aaPredicted RBP12.08□□□□□ -0.48
CLDND1-218ENST00000508503 CD86P42081 329 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 NOP2P46087 812 aaKnown RBP12.08□□□□□ -0.48
CLDND1-218ENST00000508503 GPR1P46091 355 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 POLD2P49005 469 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 PDX1P52945 283 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 ERVPABLB-1P60509 514 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 AP1B1Q10567 949 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 SPA17Q15506 151 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 COL28A1Q2UY09 1125 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 C14orf28Q4W4Y0 310 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 CERCAMQ5T4B2 595 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 RAET1GQ6H3X3 334 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 C11orf63Q6NUN7 778 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 C19orf48Q6RUI8 117 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 SPOCD1Q6ZMY3 1216 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 NT5DC3Q86UY8 548 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 GAS2L3Q86XJ1 694 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 RFX6Q8HWS3 928 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 TMTC1Q8IUR5 882 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 EXD1Q8NHP7 514 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 PTCD2Q8WV60 388 aaKnown RBP12.08□□□□□ -0.48
CLDND1-218ENST00000508503 HNRNPLLQ8WVV9 542 aaKnown RBP12.08□□□□□ -0.48
CLDND1-218ENST00000508503 EID2BQ96D98 161 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 CALR3Q96L12 384 aaKnown RBP12.08□□□□□ -0.48
CLDND1-218ENST00000508503 ZNF578Q96N58 590 aaPredicted RBP12.08□□□□□ -0.48
CLDND1-218ENST00000508503 SLC46A1Q96NT5 459 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 AGAP2Q99490 1192 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 RIOK2Q9BVS4 552 aaKnown RBP12.08□□□□□ -0.48
CLDND1-218ENST00000508503 ADGRE3Q9BY15 652 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 GOLPH3Q9H4A6 298 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 CARS2Q9HA77 564 aaKnown RBP12.08□□□□□ -0.48
CLDND1-218ENST00000508503 GLOD4Q9HC38 313 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 MAGEE1Q9HCI5 957 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 ASCL3Q9NQ33 180 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 SUFUQ9UMX1 484 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 TFR2Q9UP52 801 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 SSUH2Q9Y2M2 353 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 PCDHGA8Q9Y5G5 932 aa12.08□□□□□ -0.48
CLDND1-218ENST00000508503 hCG_1818297A0A087WSY0 165 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 NUDT21O43809 227 aaKnown RBP12.07□□□□□ -0.48
CLDND1-218ENST00000508503 CST8O60676 142 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 NDUFA10O95299 355 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 MPOP05164 745 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 ADCY8P40145 1251 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 MLLT3P42568 568 aaPredicted RBP12.07□□□□□ -0.48
CLDND1-218ENST00000508503 CCL7P80098 99 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 B4GALNT1Q00973 533 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 CTBSQ01459 385 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 WASHC5Q12768 1159 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 NR1D2Q14995 579 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 PYCR3Q53H96 274 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 TFDP3Q5H9I0 405 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 HENMT1Q5T8I9 393 aaKnown RBP12.07□□□□□ -0.48
CLDND1-218ENST00000508503 ZNF438Q7Z4V0 828 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 TMC3Q7Z5M5 1100 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 SFTPA2Q8IWL1 248 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLDND1-218ENST00000508503 LPCAT1Q8NF37 534 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 CCDC74AQ96AQ1 378 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 ATXN7L3BQ96GX2 97 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 AGAP3Q96P47 875 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 GSDMCQ9BYG8 508 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 LRRN3Q9H3W5 708 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 FAM83DQ9H4H8 585 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 LUC7LQ9NQ29 371 aaKnown RBP12.07□□□□□ -0.48
CLDND1-218ENST00000508503 SIRPGQ9P1W8 387 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 NFKBIL1Q9UBC1 381 aaPredicted RBP12.07□□□□□ -0.48
CLDND1-218ENST00000508503 SAE1Q9UBE0 346 aaPredicted RBP12.07□□□□□ -0.48
CLDND1-218ENST00000508503 CD84Q9UIB8 345 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 RALYQ9UKM9 306 aaKnown RBP12.07□□□□□ -0.48
CLDND1-218ENST00000508503 EFR3BQ9Y2G0 817 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 REXO2Q9Y3B8 237 aaKnown RBP12.07□□□□□ -0.48
CLDND1-218ENST00000508503 TTLL3Q9Y4R7 772 aa12.07□□□□□ -0.48
CLDND1-218ENST00000508503 C1orf232A0A0U1RR37 186 aa12.06□□□□□ -0.48
CLDND1-218ENST00000508503 LOC285095A0A1B0GVY8 99 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms