RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 CNGA4Q8IV77 575 aa14.23□□□□□ -0.13
RAB28-205ENST00000508274 LSMEM2Q8N112 164 aa14.23□□□□□ -0.13
RAB28-205ENST00000508274 WDR48Q8TAF3 677 aa14.23□□□□□ -0.13
RAB28-205ENST00000508274 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.23□□□□□ -0.13
RAB28-205ENST00000508274 GPBAR1Q8TDU6 330 aa14.23□□□□□ -0.13
RAB28-205ENST00000508274 RNF25Q96BH1 459 aaPredicted RBP14.23□□□□□ -0.13
RAB28-205ENST00000508274 AP2M1Q96CW1 435 aa14.23□□□□□ -0.13
RAB28-205ENST00000508274 ZNF830Q96NB3 372 aaPredicted RBP14.23□□□□□ -0.13
RAB28-205ENST00000508274 LRRN3Q9H3W5 708 aa14.23□□□□□ -0.13
RAB28-205ENST00000508274 SPATS2LQ9NUQ6 558 aaKnown RBP14.23□□□□□ -0.13
RAB28-205ENST00000508274 ATXN7L1Q9ULK2 861 aaPredicted RBP14.23□□□□□ -0.13
RAB28-205ENST00000508274 TMEM98Q9Y2Y6 226 aa14.23□□□□□ -0.13
RAB28-205ENST00000508274 PLEKHM1Q9Y4G2 1056 aa14.23□□□□□ -0.13
RAB28-205ENST00000508274 ZNF487B1APH4 448 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 APOL1O14791 398 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 GLB1P16278 677 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 ZNF30P17039 623 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 TEAD1P28347 426 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 MAZP56270 477 aaKnown RBP14.22□□□□□ -0.13
RAB28-205ENST00000508274 DYNLT1P63172 113 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 SKOR1P84550 965 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 TLE3Q04726 772 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 AP1B1Q10567 949 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 SLC30A9Q6PML9 568 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 RFX6Q8HWS3 928 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 CCNJLQ8IV13 435 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 NDUFAF2Q8N183 169 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 TC2NQ8N9U0 490 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 ZNF248Q8NDW4 579 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 PATE1Q8WXA2 126 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 SLC46A1Q96NT5 459 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 GFM1Q96RP9 751 aaKnown RBP14.22□□□□□ -0.13
RAB28-205ENST00000508274 RIOK2Q9BVS4 552 aaKnown RBP14.22□□□□□ -0.13
RAB28-205ENST00000508274 GOLPH3Q9H4A6 298 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 PRORYQ9H606 182 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 TAAR2Q9P1P5 351 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 TFR2Q9UP52 801 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 SLC17A4Q9Y2C5 497 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 ATRXP46100 2492 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 AGRPO00253 132 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 INPP4BO15327 924 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 KRT10P13645 584 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 COMTP21964 271 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 CES1P23141 567 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 ADCY8P40145 1251 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 ERVPABLB-1P60509 514 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 IFI35P80217 286 aaPredicted RBP14.22□□□□□ -0.13
RAB28-205ENST00000508274 CTBSQ01459 385 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 ILF3Q12906 894 aaKnown RBP eCLIP14.22□□□□□ -0.13
RAB28-205ENST00000508274 GALNT3Q14435 633 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 LLGL1Q15334 1064 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 QPCTQ16769 361 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 MFSD7Q6UXD7 560 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 MARK2Q7KZI7 788 aaKnown RBP14.22□□□□□ -0.13
RAB28-205ENST00000508274 TMPRSS9Q7Z410 1059 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 SPRED1Q7Z699 444 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 VSIG1Q86XK7 387 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 OR6C4Q8NGE1 309 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 WDR36Q8NI36 951 aaKnown RBP14.22□□□□□ -0.13
RAB28-205ENST00000508274 ZDHHC1Q8WTX9 485 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 GRAMD1AQ96CP6 724 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 FCRL3Q96P31 734 aaPredicted RBP14.22□□□□□ -0.13
RAB28-205ENST00000508274 OLFM3Q96PB7 478 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 WDR24Q96S15 920 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 GSDMCQ9BYG8 508 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 BRD8Q9H0E9 1235 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 EPB41L5Q9HCM4 733 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 THSD1Q9NS62 852 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 HAUS2Q9NVX0 235 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 LRIT1Q9P2V4 623 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 APPL1Q9UKG1 709 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 PCDHGA8Q9Y5G5 932 aa14.22□□□□□ -0.13
RAB28-205ENST00000508274 PCYT1BQ9Y5K3 369 aaPredicted RBP14.22□□□□□ -0.13
RAB28-205ENST00000508274 CCDC187A0A096LP49 1063 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 C1orf232A0A0U1RR37 186 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 TNFSF15O95150 251 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 FGF1P05230 155 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 IVLP07476 585 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 HGFP14210 728 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 CA4P22748 312 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 RBMS1P29558 406 aaKnown RBP14.21□□□□□ -0.14
RAB28-205ENST00000508274 NOP2P46087 812 aaKnown RBP14.21□□□□□ -0.14
RAB28-205ENST00000508274 LRRC38Q5VT99 294 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 SARM1Q6SZW1 724 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 IGF2-ASQ6U949 168 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 ADAMTSL4Q6UY14 1074 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 KDELC2Q7Z4H8 507 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 RHOT1Q8IXI2 618 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 KIAA1524Q8TCG1 905 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 LIN37Q96GY3 246 aaPredicted RBP14.21□□□□□ -0.14
RAB28-205ENST00000508274 AGAP3Q96P47 875 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 LYSMD1Q96S90 227 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 MAK16Q9BXY0 300 aaKnown RBP14.21□□□□□ -0.14
RAB28-205ENST00000508274 TRIM5Q9C035 493 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 TRNAU1APQ9NX07 287 aaKnown RBP14.21□□□□□ -0.14
RAB28-205ENST00000508274 SEPT10Q9P0V9 454 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 SAE1Q9UBE0 346 aaPredicted RBP14.21□□□□□ -0.14
RAB28-205ENST00000508274 INTUQ9ULD6 942 aa14.21□□□□□ -0.14
RAB28-205ENST00000508274 CDRT15L2A8MXV6 281 aa14.2□□□□□ -0.14
RAB28-205ENST00000508274 SPOPO43791 374 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms