RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 TMBIM4Q9HC24 238 aa17.42■□□□□ 0.38
RNF4-209ENST00000507784 RAD18Q9NS91 495 aa17.42■□□□□ 0.38
RNF4-209ENST00000507784 NSMCE4AQ9NXX6 385 aa17.42■□□□□ 0.38
RNF4-209ENST00000507784 PSMC3IPQ9P2W1 217 aaPredicted RBP17.42■□□□□ 0.38
RNF4-209ENST00000507784 FETUBQ9UGM5 382 aa17.42■□□□□ 0.38
RNF4-209ENST00000507784 APPL1Q9UKG1 709 aa17.42■□□□□ 0.38
RNF4-209ENST00000507784 SIT1Q9Y3P8 196 aa17.42■□□□□ 0.38
RNF4-209ENST00000507784 SPTBN5Q9NRC6 3674 aaKnown RBP17.42■□□□□ 0.38
RNF4-209ENST00000507784 LRRK1Q38SD2 2015 aa17.42■□□□□ 0.38
RNF4-209ENST00000507784 PRUNE2Q8WUY3 3088 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 PRR23AA6NEV1 266 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 SPINT1O43278 529 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 TSPAN6O43657 245 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 CDH16O75309 829 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 PRSS56P0CW18 603 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 PSMA3P25788 255 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 PMLP29590 882 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 ETV3P41162 512 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 SLC1A2P43004 574 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 MPP1Q00013 466 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 PEX6Q13608 980 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 HSP90B2PQ58FF3 399 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 GRTP1Q5TC63 336 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 LGSNQ5TDP6 509 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 ZDHHC20Q5W0Z9 365 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 MRNIPQ6NTE8 343 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 ADGRD1Q6QNK2 874 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 PACS1Q6VY07 963 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 Q6ZVL8 140 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 LDB1Q86U70 411 aaPredicted RBP17.41■□□□□ 0.38
RNF4-209ENST00000507784 DENND6AQ8IWF6 608 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 LMNTD2Q8IXW0 634 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.41■□□□□ 0.382e-6■■■■■ 54.9
RNF4-209ENST00000507784 HHIPQ96QV1 700 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 CPNE1Q99829 537 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 OSBPL6Q9BZF3 934 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 FAM83DQ9H4H8 585 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 ASB8Q9H765 288 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 FBXO6Q9NRD1 293 aaPredicted RBP17.41■□□□□ 0.38
RNF4-209ENST00000507784 MARCH4Q9P2E8 410 aaPredicted RBP17.41■□□□□ 0.38
RNF4-209ENST00000507784 FBXO5Q9UKT4 447 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 PSAT1Q9Y617 370 aa17.41■□□□□ 0.38
RNF4-209ENST00000507784 IQANK1A0A1B0GTG1 560 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 H0Y858 1186 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 H7C0S8 307 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 PSMD11O00231 422 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 WNT9AO14904 365 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 AP1G1O43747 822 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 SRP72O76094 671 aaKnown RBP17.4■□□□□ 0.38
RNF4-209ENST00000507784 DCNP07585 359 aaKnown RBP17.4■□□□□ 0.38
RNF4-209ENST00000507784 C6P13671 934 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 ITGALP20701 1170 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 GP5P40197 560 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 CDKN1CP49918 316 aaPredicted RBP17.4■□□□□ 0.38
RNF4-209ENST00000507784 SERPINB9P50453 376 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 PTPN5P54829 565 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 TAS2R38P59533 333 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 XIAPP98170 497 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 CACNG1Q06432 222 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 SIGLEC14Q08ET2 396 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 CHRNA6Q15825 494 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 ANO7Q6IWH7 933 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 TAOK1Q7L7X3 1001 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 KBTBD6Q86V97 674 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 TDRPQ86YL5 185 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.4■□□□□ 0.38
RNF4-209ENST00000507784 RIBC1Q8N443 379 aaPredicted RBP17.4■□□□□ 0.38
RNF4-209ENST00000507784 PNPLA1Q8N8W4 532 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 ZNF398Q8TD17 642 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 SPATA16Q9BXB7 569 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 IL26Q9NPH9 171 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 C2orf42Q9NWW7 574 aa17.4■□□□□ 0.38
RNF4-209ENST00000507784 ZNF106Q9H2Y7 1883 aaKnown RBP17.39■□□□□ 0.38
RNF4-209ENST00000507784 TBC1D3DA0A087WVF3 549 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 TBC1D3IA0A087WXS9 549 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 TBC1D3EA0A087X179 549 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 TBC1D3KA0A087X1G2 549 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 TBC1D3FA6NER0 549 aaPredicted RBP17.39■□□□□ 0.37
RNF4-209ENST00000507784 FAM47DPA6NHR8 397 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 TBC1D3LB9A6J9 549 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 NDUFS3O75489 264 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 PRAMEF1O95521 474 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 TBC1D3HP0C7X1 549 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 KRT15P19012 456 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 UGT1A6P19224 532 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 UGT1A1P22309 533 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 UGT1A4P22310 534 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 FOXN2P32314 431 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 SPRP35270 261 aaPredicted RBP17.39■□□□□ 0.37
RNF4-209ENST00000507784 UGT1A3P35503 534 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 UGT1A5P35504 534 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 ABCG1P45844 678 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 SEMA3AQ14563 771 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 TBC1D3GQ6DHY5 549 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 TBC1D3CQ6IPX1 549 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 PSAPL1Q6NUJ1 521 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 USP30Q70CQ3 517 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 TECPR1Q7Z6L1 1165 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 CNTN4Q8IWV2 1026 aa17.39■□□□□ 0.37
RNF4-209ENST00000507784 NRSN1Q8IZ57 195 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms