RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 H2AFZP0C0S5 128 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 HGFP14210 728 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 MX2P20592 715 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 ALDH4A1P30038 563 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 GJC1P36383 396 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 ADCY8P40145 1251 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 GPR3P46089 330 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 MAZP56270 477 aaKnown RBP12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 CTBSQ01459 385 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 PTSQ03393 145 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 AMZ1Q400G9 498 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 ANKRD20A8PQ5CZ79 823 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 PHF19Q5T6S3 580 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 LRRC66Q68CR7 880 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 ALG1LQ6GMV1 187 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 SLC30A9Q6PML9 568 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 ADAMTSL4Q6UY14 1074 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 H2AFVQ71UI9 128 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 ZNF765Q7L2R6 523 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 ZNF438Q7Z4V0 828 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 SLITRK4Q8IW52 837 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 RAVER1Q8IY67 606 aaKnown RBP12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 NRSN1Q8IZ57 195 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 CTNNBL1Q8WYA6 563 aaPredicted RBP12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 TTC9Q92623 222 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 SCARF2Q96GP6 870 aaPredicted RBP12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 ABCG8Q9H221 673 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 CD84Q9UIB8 345 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 TTLL3Q9Y4R7 772 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.02□□□□□ -0.493e-7■■■□□ 18.8
PDLIM7-214ENST00000505746 BAHCC1Q9P281 2608 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 LIPCP11150 499 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 AK4P27144 223 aaPredicted RBP12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 CASP14P31944 242 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 POLD2P49005 469 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 OR1D5P58170 312 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 RPL26P61254 145 aaKnown RBP12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 DSC2Q02487 901 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 NR1D2Q14995 579 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 PTPRRQ15256 657 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 SKOR2Q2VWA4 1001 aaPredicted RBP12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 ATP13A4Q4VNC1 1196 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 ZFYVE27Q5T4F4 411 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 TMEM164Q5U3C3 297 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 DOK6Q6PKX4 331 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 EXD1Q8NHP7 514 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 OR2M4Q96R27 311 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 TDRD1Q9BXT4 1180 aaKnown RBP12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 B3GNT4Q9C0J1 378 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 SEMA6CQ9H3T2 930 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 RDH14Q9HBH5 336 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 IFNKQ9P0W0 207 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 RPL26L1Q9UNX3 145 aaKnown RBP12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 CHKBQ9Y259 395 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 PCDHB11Q9Y5F2 797 aa12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 SMG1Q96Q15 3661 aaKnown RBP12.01□□□□□ -0.49
PDLIM7-214ENST00000505746 HGSO14964 777 aaPredicted RBP12□□□□□ -0.49
PDLIM7-214ENST00000505746 MAP3K6O95382 1288 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 SOD1P00441 154 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 ITIH1P19827 911 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 CD82P27701 267 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 HNRNPH3P31942 346 aaKnown RBP12□□□□□ -0.49
PDLIM7-214ENST00000505746 ACTR1BP42025 376 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 STC1P52823 247 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 MAPK10P53779 464 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 ACTR1AP61163 376 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 LRP8Q14114 963 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 USP53Q70EK8 1073 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 TMPRSS9Q7Z410 1059 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 GALNT13Q8IUC8 556 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 NAGSQ8N159 534 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 CCNYQ8ND76 341 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 ARRDC2Q8TBH0 407 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 USP7Q93009 1102 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 SCAMP4Q969E2 229 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 FAF2Q96CS3 445 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 ZNF830Q96NB3 372 aaPredicted RBP12□□□□□ -0.49
PDLIM7-214ENST00000505746 DPYSL5Q9BPU6 564 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 DEF6Q9H4E7 631 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 PCDH9Q9HC56 1237 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 NENFQ9UMX5 172 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 TMEM98Q9Y2Y6 226 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 BPTFQ12830 3046 aa12□□□□□ -0.49
PDLIM7-214ENST00000505746 COL27A1Q8IZC6 1860 aaPredicted RBP12□□□□□ -0.49
PDLIM7-214ENST00000505746 PRAMEF33A0A0G2JMD5 474 aa11.99□□□□□ -0.49
PDLIM7-214ENST00000505746 A0A0U1RQS6 177 aa11.99□□□□□ -0.49
PDLIM7-214ENST00000505746 AGRPO00253 132 aa11.99□□□□□ -0.49
PDLIM7-214ENST00000505746 EFSO43281 561 aa11.99□□□□□ -0.49
PDLIM7-214ENST00000505746 PRAMEF10O60809 474 aa11.99□□□□□ -0.49
PDLIM7-214ENST00000505746 CLDN7O95471 211 aa11.99□□□□□ -0.49
PDLIM7-214ENST00000505746 ASMTLO95671 621 aa11.99□□□□□ -0.49
PDLIM7-214ENST00000505746 PLA2G2AP14555 144 aa11.99□□□□□ -0.49
PDLIM7-214ENST00000505746 CD1CP29017 333 aa11.99□□□□□ -0.49
PDLIM7-214ENST00000505746 MAN1A1P33908 653 aa11.99□□□□□ -0.49
PDLIM7-214ENST00000505746 TAS2R40P59535 323 aa11.99□□□□□ -0.49
PDLIM7-214ENST00000505746 GBE1Q04446 702 aa11.99□□□□□ -0.49
PDLIM7-214ENST00000505746 SQSTM1Q13501 440 aa11.99□□□□□ -0.49
PDLIM7-214ENST00000505746 TRA2AQ13595 282 aaKnown RBP eCLIP11.99□□□□□ -0.49
PDLIM7-214ENST00000505746 LY6DQ14210 128 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms