RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 ELOCQ15369 112 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 SLC18A3Q16572 532 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 ALG1LQ6GMV1 187 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 RBM44Q6ZP01 1051 aaKnown RBP13.12□□□□□ -0.31
DDX41-204ENST00000504807 B4GALNT4Q76KP1 1039 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 PTRH1Q86Y79 214 aaKnown RBP13.12□□□□□ -0.31
DDX41-204ENST00000504807 PATE1Q8WXA2 126 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 SCRN2Q96FV2 425 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 WDR24Q96S15 920 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 FRMD8Q9BZ67 464 aaPredicted RBP13.12□□□□□ -0.31
DDX41-204ENST00000504807 EPN3Q9H201 632 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 WDR26Q9H7D7 661 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 SYNDIG1Q9H7V2 258 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 CTTNBP2NLQ9P2B4 639 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 RCOR3Q9P2K3 495 aaPredicted RBP13.12□□□□□ -0.31
DDX41-204ENST00000504807 PPIL1Q9Y3C6 166 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 RNF215Q9Y6U7 377 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 PRSS38A1L453 326 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 CDRT15L2A8MXV6 281 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 B4DGG1 531 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 PPFIA2O75334 1257 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 TNFP01375 233 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 RPLP0P05388 317 aaKnown RBP13.11□□□□□ -0.31
DDX41-204ENST00000504807 HOXC4P09017 264 aaPredicted RBP13.11□□□□□ -0.31
DDX41-204ENST00000504807 SFTPCP11686 197 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 HTR1BP28222 390 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 POLR2LP62875 67 aaKnown RBP13.11□□□□□ -0.31
DDX41-204ENST00000504807 FOXK1P85037 733 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 CDK3Q00526 305 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 ZBTB17Q13105 803 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 HLTFQ14527 1009 aaKnown RBP eCLIP13.11□□□□□ -0.31
DDX41-204ENST00000504807 SKIDA1Q1XH10 827 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 LRRC66Q68CR7 880 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 LVRNQ6Q4G3 990 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 NPNTQ6UXI9 565 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 PLD5Q8N7P1 536 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 CNTD1Q8N815 330 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 Q8N9G6 341 aaPredicted RBP13.11□□□□□ -0.31
DDX41-204ENST00000504807 SCAMP4Q969E2 229 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 EID2BQ96D98 161 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 SGF29Q96ES7 293 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 TDRD1Q9BXT4 1180 aaKnown RBP13.11□□□□□ -0.31
DDX41-204ENST00000504807 CEP41Q9BYV8 373 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 ABCG8Q9H221 673 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 DTLQ9NZJ0 730 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 NCKIPSDQ9NZQ3 722 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 PHTF1Q9UMS5 762 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 CHKBQ9Y259 395 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 HYOU1Q9Y4L1 999 aa13.11□□□□□ -0.31
DDX41-204ENST00000504807 D6RAR5 112 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 CACNB4O00305 520 aaPredicted RBP13.1□□□□□ -0.31
DDX41-204ENST00000504807 MATN3O15232 486 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 EML2O95834 649 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 ITGB2P05107 769 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 FGF1P05230 155 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 MYCLP1P12525 358 aaPredicted RBP13.1□□□□□ -0.31
DDX41-204ENST00000504807 HSPA9P38646 679 aaKnown RBP13.1□□□□□ -0.31
DDX41-204ENST00000504807 BLKP51451 505 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 INHBCP55103 352 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 TPM4P67936 248 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 SRSF6Q13247 344 aaKnown RBP13.1□□□□□ -0.31
DDX41-204ENST00000504807 CERCAMQ5T4B2 595 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 ARMC12Q5T9G4 340 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 SPECC1LQ69YQ0 1117 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 TAF8Q7Z7C8 310 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 C17orf82Q86X59 251 aaPredicted RBP13.1□□□□□ -0.31
DDX41-204ENST00000504807 GKN2Q86XP6 184 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 VSTM4Q8IW00 320 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 PAF1Q8N7H5 531 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 KCTD6Q8NC69 237 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 RNF214Q8ND24 703 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 FAM46DQ8NEK8 389 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 GPBAR1Q8TDU6 330 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 NAT6Q93015 286 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 TSGA13Q96PP4 275 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 ZNF670Q9BS34 389 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 SLC25A18Q9H1K4 315 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 CARS2Q9HA77 564 aaKnown RBP13.1□□□□□ -0.31
DDX41-204ENST00000504807 ABHD10Q9NUJ1 306 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 RBM22Q9NW64 420 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDX41-204ENST00000504807 MOSPD1Q9UJG1 213 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 SUFUQ9UMX1 484 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 DOLKQ9UPQ8 538 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 TMEM98Q9Y2Y6 226 aa13.1□□□□□ -0.31
DDX41-204ENST00000504807 A0A0J9YYE9 177 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 KCNK1O00180 336 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 TNFRSF10CO14798 259 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 B4GAT1O43505 415 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 MFAP3LO75121 409 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 TCEA3O75764 348 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 TRBC1P01850 177 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 TMEM253P0C7T8 217 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 KDELR1P24390 212 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 SERPINB6P35237 376 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 ETV5P41161 510 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 GNPDA1P46926 289 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 RPIAP49247 311 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 B4GALNT1Q00973 533 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 ITKQ08881 620 aa13.09□□□□□ -0.31
DDX41-204ENST00000504807 SPIDRQ14159 915 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms