RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 CCDC68Q9H2F9 335 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 NCOR1P1Q9H4R4 102 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 DBNDD1Q9H9R9 158 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 SEPSECSQ9HD40 501 aaKnown RBP2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 RASSF1Q9NS23 344 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 TMLHEQ9NVH6 421 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 PPP1R14DQ9NXH3 145 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 SMARCAL1Q9NZC9 954 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 LRFN1Q9P244 771 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 FNIP2Q9P278 1114 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 MTUS1Q9ULD2 1270 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 PA2G4Q9UQ80 394 aaKnown RBP2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 CARD8Q9Y2G2 431 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 TMED5Q9Y3A6 229 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 SNX5Q9Y5X3 404 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 GAKO14976 1311 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 RPAP1Q9BWH6 1393 aaPredicted RBP2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 ATAD2BQ9ULI0 1458 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 AQP12BA6NM10 295 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 PLOD2O00469 737 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 NDC80O14777 642 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 LSM1O15116 133 aaKnown RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 FGF17O60258 216 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 CBX6O95503 412 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 ATP1A1P05023 1023 aaKnown RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 ITGA2BP08514 1039 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 CETPP11597 493 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 MSNP26038 577 aaKnown RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 SSTR2P30874 369 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 CTNNA1P35221 906 aaKnown RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 UBA7P41226 1012 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 EPS15P42566 896 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 TECP42680 631 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 MATR3P43243 847 aaKnown RBP eCLIP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 ASMTP46597 345 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 PPM1FP49593 454 aaPredicted RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 CSRP3P50461 194 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 HSD17B4P51659 736 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 BPIFB3P59826 476 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 ARPC4P59998 168 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 AP2B1P63010 937 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZBED6P86452 979 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 FAM27E3Q08E93 113 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 TRAP1Q12931 704 aaKnown RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 STARD3Q14849 445 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 PPP2R5BQ15173 497 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 RCN1Q15293 331 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 PKN2Q16513 984 aaKnown RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 C15orf59Q2T9L4 293 aaPredicted RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 RABL6Q3YEC7 729 aaPredicted RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 RUNDC3AQ59EK9 446 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 RILPL1Q5EBL4 403 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 NAA16Q6N069 864 aaPredicted RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 ANGPTL8Q6UXH0 198 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 CYP26C1Q6V0L0 522 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 MMS22LQ6ZRQ5 1243 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 MCM10Q7L590 875 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 SPATA21Q7Z572 469 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 SRLQ86TD4 932 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 SPATA24Q86W54 205 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 SFR1Q86XK3 245 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 ITPRIPQ8IWB1 547 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 LSMEM2Q8N112 164 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 OR8H2Q8N162 312 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 AFAP1Q8N556 730 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 AADATQ8N5Z0 425 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 ENAHQ8N8S7 591 aaPredicted RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 IQUBQ8NA54 791 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 FAM71BQ8TC56 605 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 STT3BQ8TCJ2 826 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 STYXQ8WUJ0 223 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 PIBF1Q8WXW3 757 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 TRIB2Q92519 343 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 USP13Q92995 863 aaPredicted RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 EXOC4Q96A65 974 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 NRBF2Q96F24 287 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 RBM17Q96I25 401 aaKnown RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 SGCZQ96LD1 299 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 LRFN5Q96NI6 719 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 THUMPD2Q9BTF0 503 aaKnown RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 HERC2P3Q9BVR0 1158 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 AGXT2Q9BYV1 514 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 CLPBQ9H078 707 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 FAM107BQ9H098 131 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 ELAC1Q9H777 363 aaKnown RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 EBF2Q9HAK2 575 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 PLEKHA5Q9HAU0 1116 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 SEPT11Q9NVA2 429 aaKnown RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 IL1RAPL1Q9NZN1 696 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 NDUFAF4Q9P032 175 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 TBK1Q9UHD2 729 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 DDX25Q9UHL0 483 aaKnown RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 GRID1Q9ULK0 1009 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 PHTF1Q9UMS5 762 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 DAPP1Q9UN19 280 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 C19orf53Q9UNZ5 99 aaPredicted RBP2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 SNX9Q9Y5X1 595 aa2.07□□□□□ -2.08
HMGB3P17-201ENST00000504195 GMEB1Q9Y692 573 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms