RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 SLC41A1Q8IVJ1 513 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 RGL4Q8IZJ4 473 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 DNAAF3Q8N9W5 541 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 OR52K1Q8NGK4 314 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 BLOC1S5Q8TDH9 187 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 CPT1BQ92523 772 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 KLK6Q92876 244 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 BIRC7Q96CA5 298 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 LYSMD1Q96S90 227 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 GPR63Q9BZJ6 419 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 TRIM31Q9BZY9 425 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 PRORYQ9H606 182 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 MAGEE1Q9HCI5 957 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 HACD3Q9P035 362 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 SHOC2Q9UQ13 582 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.03□□□□□ -0.8
NUP54-203ENST00000504173 COQ6Q9Y2Z9 468 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 ZNF711Q9Y462 761 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 THADAQ6YHU6 1953 aa10.03□□□□□ -0.8
NUP54-203ENST00000504173 NOTCH2Q04721 2471 aa10.02□□□□□ -0.8
NUP54-203ENST00000504173 ATMQ13315 3056 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 A0A0U1RQS6 177 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 TCRBV7S3A2A0A539 114 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 GOLGA8CPA6NN73 597 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 PATE3B3GLJ2 98 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 PSMD11O00231 422 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 DNALI1O14645 258 aaPredicted RBP10.02□□□□□ -0.81
NUP54-203ENST00000504173 SLC31A1O15431 190 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 LATO43561 262 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 CLDN7O95471 211 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 IGHV4-34P06331 123 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 NUDT1P36639 197 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 GRIA1P42261 906 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 PTGER3P43115 390 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 MAGEA6P43360 314 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 STC1P52823 247 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 CDK16Q00536 496 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 CFHR1Q03591 330 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 CDH17Q12864 832 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 WDR45BQ5MNZ6 344 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 RNASEH2BQ5TBB1 312 aaKnown RBP10.02□□□□□ -0.81
NUP54-203ENST00000504173 ANKRD22Q5VYY1 191 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 IZUMO3Q5VZ72 239 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 DENND5AQ6IQ26 1287 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 LYSMD3Q7Z3D4 306 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 PPIL6Q8IXY8 311 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 MMGT1Q8N4V1 131 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 NOA1Q8NC60 698 aaKnown RBP10.02□□□□□ -0.81
NUP54-203ENST00000504173 SNF8Q96H20 258 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 MYOCQ99972 504 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 C1QTNF7Q9BXJ2 289 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 SLC17A9Q9BYT1 436 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 RAB17Q9H0T7 212 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 MIR1-1HGQ9H1L0 117 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 TRABDQ9H4I3 376 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 L2HGDHQ9H9P8 463 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 ZFYVE1Q9HBF4 777 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 ARNT2Q9HBZ2 717 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 CASS4Q9NQ75 786 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 PIH1D1Q9NWS0 290 aaKnown RBP10.02□□□□□ -0.81
NUP54-203ENST00000504173 UTP11Q9Y3A2 253 aaKnown RBP10.02□□□□□ -0.81
NUP54-203ENST00000504173 SPO11Q9Y5K1 396 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 TRPM6Q9BX84 2022 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 ABCA12Q86UK0 2595 aa10.02□□□□□ -0.81
NUP54-203ENST00000504173 DOPEY1Q5JWR5 2465 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 PLXNB3Q9ULL4 1909 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 PTPRQQ9UMZ3 2332 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 A0A1W2PPC4 97 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 C10orf142B7Z368 130 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 GOLGA8MH3BSY2 632 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 AP3B1O00203 1094 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 NDC80O14777 642 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 WNT9AO14904 365 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 KRT38O76015 456 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 RECQL5O94762 991 aaPredicted RBP10.01□□□□□ -0.81
NUP54-203ENST00000504173 TMEM63AO94886 807 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 CRTAMO95727 393 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 PAK4O96013 591 aaPredicted RBP10.01□□□□□ -0.81
NUP54-203ENST00000504173 C1SP09871 688 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 TPH1P17752 444 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 IVDP26440 423 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 CD27P26842 260 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 MAOBP27338 520 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 AKT2P31751 481 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 ETV3P41162 512 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 SESN2P58004 480 aaPredicted RBP10.01□□□□□ -0.81
NUP54-203ENST00000504173 PTSQ03393 145 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 SEPT6Q14141 434 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 FGL2Q14314 439 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 MORF4L2Q15014 288 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 CDKN3Q16667 212 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 CYP2U1Q7Z449 544 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 GLT6D1Q7Z4J2 308 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 HSD11B1LQ7Z5J1 315 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 HOOK3Q86VS8 718 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 NAT8LQ8N9F0 302 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 BBOF1Q8ND07 529 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 BRSK1Q8TDC3 778 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 NUS1Q96E22 293 aa10.01□□□□□ -0.81
NUP54-203ENST00000504173 SERAC1Q96JX3 654 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms