RNA–Protein interactions for RNA: ENST00000504147.5

CDK7-203, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-203ENST00000504147 FNDC3AQ9Y2H6 1198 aaKnown RBP10.22□□□□□ -0.77
CDK7-203ENST00000504147 SLC30A1Q9Y6M5 507 aa10.22□□□□□ -0.77
CDK7-203ENST00000504147 MTCL1Q9Y4B5 1905 aaKnown RBP10.22□□□□□ -0.77
CDK7-203ENST00000504147 NOTCH4Q99466 2003 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 UBA6A0AVT1 1052 aaPredicted RBP10.21□□□□□ -0.77
CDK7-203ENST00000504147 OTOL1A6NHN0 477 aaPredicted RBP10.21□□□□□ -0.77
CDK7-203ENST00000504147 A8MX80 341 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.21□□□□□ -0.77
CDK7-203ENST00000504147 TARM1B6A8C7 271 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 TRIM13O60858 407 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 SRP72O76094 671 aaKnown RBP10.21□□□□□ -0.77
CDK7-203ENST00000504147 RHOBTB1O94844 696 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 WISP3O95389 354 aaPredicted RBP10.21□□□□□ -0.77
CDK7-203ENST00000504147 LTA4HP09960 611 aaKnown RBP10.21□□□□□ -0.77
CDK7-203ENST00000504147 SBK3P0C264 359 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 CCDC166P0CW27 439 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 SP100P23497 879 aaPredicted RBP10.21□□□□□ -0.77
CDK7-203ENST00000504147 SLC1A6P48664 564 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 TTPAP49638 278 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 SUOXP51687 545 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 PRKAA2P54646 552 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 PTPN5P54829 565 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 ST8SIA6P61647 398 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 POLR2LP62875 67 aaKnown RBP10.21□□□□□ -0.77
CDK7-203ENST00000504147 TIAL1Q01085 375 aaKnown RBP eCLIP10.21□□□□□ -0.77
CDK7-203ENST00000504147 ITGA9Q13797 1035 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 PTPRNQ16849 979 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 ARSIQ5FYB1 569 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 AGAP9Q5VTM2 703 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 CES5AQ6NT32 575 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 PSAPL1Q6NUJ1 521 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 TMEM207Q6UWW9 146 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 VITQ6UXI7 678 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 USP45Q70EL2 814 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 TRPM8Q7Z2W7 1104 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 CRLF3Q8IUI8 442 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 YAF2Q8IY57 180 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 CBARPQ8N350 705 aaPredicted RBP10.21□□□□□ -0.77
CDK7-203ENST00000504147 CPA6Q8N4T0 437 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 OR6Y1Q8NGX8 325 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 ZNF398Q8TD17 642 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 ANKRD49Q8WVL7 239 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 C10orf82Q8WW14 230 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 CCT6BQ92526 530 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 NXPE3Q969Y0 559 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.21□□□□□ -0.77
CDK7-203ENST00000504147 UBXN10Q96LJ8 280 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 MCCC1Q96RQ3 725 aaPredicted RBP10.21□□□□□ -0.77
CDK7-203ENST00000504147 LYSMD1Q96S90 227 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 MYADMQ96S97 322 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 MRPL57Q9BQC6 102 aaKnown RBP10.21□□□□□ -0.77
CDK7-203ENST00000504147 TRIM55Q9BYV6 548 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 S1PR5Q9H228 398 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 MRPL46Q9H2W6 279 aaKnown RBP10.21□□□□□ -0.77
CDK7-203ENST00000504147 KDM4CQ9H3R0 1056 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 BRD9Q9H8M2 597 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 POPDC3Q9HBV1 291 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 HPS4Q9NQG7 708 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 OXSMQ9NWU1 459 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 CLEC1BQ9P126 229 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 PLA2G4CQ9UP65 541 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 USH1CQ9Y6N9 552 aa10.21□□□□□ -0.77
CDK7-203ENST00000504147 ATXN2Q99700 1313 aaKnown RBP10.21□□□□□ -0.78
CDK7-203ENST00000504147 NPIPB15A6NHN6 443 aaPredicted RBP10.2□□□□□ -0.78
CDK7-203ENST00000504147 TMEM114B3SHH9 223 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 PRRT4C9JH25 899 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 ITM2AO43736 263 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 DLX3O60479 287 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 H2AFYO75367 372 aaKnown RBP10.2□□□□□ -0.78
CDK7-203ENST00000504147 LEFTY1O75610 366 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 RBP1P09455 135 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 PKMP14618 531 aaKnown RBP10.2□□□□□ -0.78
CDK7-203ENST00000504147 TIMP2P16035 220 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 BPIP17213 487 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 PPARGP37231 505 aaPredicted RBP10.2□□□□□ -0.78
CDK7-203ENST00000504147 PTGER3P43115 390 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 ARFIP2P53365 341 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 ABCE1P61221 599 aaKnown RBP10.2□□□□□ -0.78
CDK7-203ENST00000504147 SEMG2Q02383 582 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 KDSRQ06136 332 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 RUNX3Q13761 415 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 CSHL1Q14406 222 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 ACAP2Q15057 778 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 CHRNA6Q15825 494 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 LACTB2Q53H82 288 aaPredicted RBP10.2□□□□□ -0.78
CDK7-203ENST00000504147 LYPLAL1Q5VWZ2 237 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 DENND4CQ5VZ89 1909 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 KLC3Q6P597 504 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 BRAT1Q6PJG6 821 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 FAM151BQ6UXP7 276 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 CERS6Q6ZMG9 384 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 SNX20Q7Z614 316 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 TSPAN33Q86UF1 283 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 PIM3Q86V86 326 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 SPNS2Q8IVW8 549 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 KDM1BQ8NB78 822 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 GRIN3AQ8TCU5 1115 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 RMDN2Q96LZ7 410 aa10.2□□□□□ -0.78
CDK7-203ENST00000504147 GATA5Q9BWX5 397 aaPredicted RBP10.2□□□□□ -0.78
CDK7-203ENST00000504147 PLA2G2FQ9BZM2 168 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms