RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 RFC2P35250 354 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 CD86P42081 329 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 RCAN2Q14206 197 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 FAM110CQ1W6H9 321 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 VPS26BQ4G0F5 336 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 KLHL35Q6PF15 583 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 PRR23BQ6ZRT6 265 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 KDELC2Q7Z4H8 507 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 SPPL2CQ8IUH8 684 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 CMTR2Q8IYT2 770 aaKnown RBP14.95□□□□□ -0.02
SNF8-203ENST00000504000 ZNF683Q8IZ20 524 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 ZNF786Q8N393 782 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 OR6P1Q8NGX9 317 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 SLC39A13Q96H72 371 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 C1QTNF3Q9BXJ4 246 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 NUSAP1Q9BXS6 441 aaKnown RBP14.95□□□□□ -0.02
SNF8-203ENST00000504000 PRDM5Q9NQX1 630 aaPredicted RBP14.95□□□□□ -0.02
SNF8-203ENST00000504000 INTS10Q9NVR2 710 aaKnown RBP14.95□□□□□ -0.02
SNF8-203ENST00000504000 TMEM9Q9P0T7 183 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 CACNG4Q9UBN1 327 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 AURKCQ9UQB9 309 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 TLR6Q9Y2C9 796 aa14.95□□□□□ -0.02
SNF8-203ENST00000504000 TCRBV5S2A0A599 114 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 SAC3D1A6NKF1 404 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 GLP2RO95838 553 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 ATXN1LP0C7T5 689 aaKnown RBP14.94□□□□□ -0.02
SNF8-203ENST00000504000 ARSDP51689 593 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 SLC5A3P53794 718 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 EEFSECP57772 596 aaKnown RBP14.94□□□□□ -0.02
SNF8-203ENST00000504000 MRPS6P82932 125 aaKnown RBP14.94□□□□□ -0.02
SNF8-203ENST00000504000 TIAL1Q01085 375 aaKnown RBP eCLIP14.94□□□□□ -0.02
SNF8-203ENST00000504000 LCP2Q13094 533 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 NOMO2Q5JPE7 1267 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 PITRM1Q5JRX3 1037 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 SIRPB2Q5JXA9 342 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 ACBD5Q5T8D3 534 aaPredicted RBP14.94□□□□□ -0.02
SNF8-203ENST00000504000 MSANTD2Q6P1R3 559 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 USP51Q70EK9 711 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 SCD5Q86SK9 330 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 C14orf80Q86SX3 495 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 CLVS1Q8IUQ0 354 aaPredicted RBP14.94□□□□□ -0.02
SNF8-203ENST00000504000 THEM5Q8N1Q8 247 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 SCAMP5Q8TAC9 235 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 TMEM125Q96AQ2 219 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 PLEKHG4BQ96PX9 1271 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 NPLQ9BXD5 320 aaPredicted RBP14.94□□□□□ -0.02
SNF8-203ENST00000504000 SYTL2Q9HCH5 934 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 NT5MQ9NPB1 228 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 PFDN4Q9NQP4 134 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 TMLHEQ9NVH6 421 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 MPP6Q9NZW5 540 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 SFMBT1Q9UHJ3 866 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 ST3GAL5Q9UNP4 418 aa14.94□□□□□ -0.02
SNF8-203ENST00000504000 PTPRDP23468 1912 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 MIA3Q5JRA6 1907 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 IGLV3-10A0A075B6K4 115 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 MOXD2PA6NHM9 499 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 H0YAE9 185 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 KERAO60938 352 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 ZNF623O75123 536 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 EEDO75530 441 aaKnown RBP14.93□□□□□ -0.02
SNF8-203ENST00000504000 GNAO1P09471 354 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 ZNF865P0CJ78 1059 aaPredicted RBP14.93□□□□□ -0.02
SNF8-203ENST00000504000 NELFEP18615 380 aaKnown RBP14.93□□□□□ -0.02
SNF8-203ENST00000504000 HLA-DPA1P20036 260 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 CAPGP40121 348 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 AFF1P51825 1210 aaKnown RBP14.93□□□□□ -0.02
SNF8-203ENST00000504000 CDH13P55290 713 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 CDH15P55291 814 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 SLC10A7Q0GE19 358 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 GRSF1Q12849 480 aaKnown RBP eCLIP14.93□□□□□ -0.02
SNF8-203ENST00000504000 RPS6KA2Q15349 733 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 ZNF549Q6P9A3 640 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 AGMOQ6ZNB7 445 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 Q6ZNX1 250 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 DHRSXQ8N5I4 330 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 ARRDC2Q8TBH0 407 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 PPP1R13LQ8WUF5 828 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 KIAA1191Q96A73 305 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 C12orf43Q96C57 262 aaKnown RBP14.93□□□□□ -0.02
SNF8-203ENST00000504000 LRCH3Q96II8 777 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 BRINP2Q9C0B6 783 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 ZYG11BQ9C0D3 744 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 TUBB1Q9H4B7 451 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 CXorf21Q9HAI6 301 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 SMPD3Q9NY59 655 aaPredicted RBP14.93□□□□□ -0.02
SNF8-203ENST00000504000 MARCH4Q9P2E8 410 aaPredicted RBP14.93□□□□□ -0.02
SNF8-203ENST00000504000 POLG2Q9UHN1 485 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 FAF1Q9UNN5 650 aaPredicted RBP14.93□□□□□ -0.02
SNF8-203ENST00000504000 OAS3Q9Y6K5 1087 aaKnown RBP14.93□□□□□ -0.02
SNF8-203ENST00000504000 BPTFQ12830 3046 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 M0QZ92 97 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 CD3EAPO15446 510 aaKnown RBP14.93□□□□□ -0.02
SNF8-203ENST00000504000 CLOCKO15516 846 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 FGF1P05230 155 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 IMPDH2P12268 514 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 HGFP14210 728 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 HTR1EP28566 365 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 HMOX2P30519 316 aa14.93□□□□□ -0.02
SNF8-203ENST00000504000 PBX3P40426 434 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms