RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 C16orf45Q96MC5 204 aaPredicted RBP25.03■■□□□ 1.6
LSM6-202ENST00000502781 FAM83DQ9H4H8 585 aa25.03■■□□□ 1.6
LSM6-202ENST00000502781 WDR26Q9H7D7 661 aa25.03■■□□□ 1.6
LSM6-202ENST00000502781 RAD18Q9NS91 495 aa25.03■■□□□ 1.6
LSM6-202ENST00000502781 PCYOX1Q9UHG3 505 aa25.03■■□□□ 1.6
LSM6-202ENST00000502781 PCDHGB2Q9Y5G2 931 aa25.03■■□□□ 1.6
LSM6-202ENST00000502781 PCDHGA12O60330 932 aa25.02■■□□□ 1.6
LSM6-202ENST00000502781 KRT14P02533 472 aa25.02■■□□□ 1.6
LSM6-202ENST00000502781 PYGLP06737 847 aa25.02■■□□□ 1.6
LSM6-202ENST00000502781 BPIP17213 487 aa25.02■■□□□ 1.6
LSM6-202ENST00000502781 ARRB1P49407 418 aaPredicted RBP25.02■■□□□ 1.6
LSM6-202ENST00000502781 CCT8P50990 548 aa25.02■■□□□ 1.6
LSM6-202ENST00000502781 EIF2B5Q13144 721 aaKnown RBP25.02■■□□□ 1.6
LSM6-202ENST00000502781 TAF1AQ15573 450 aaPredicted RBP25.02■■□□□ 1.6
LSM6-202ENST00000502781 RAET1GQ6H3X3 334 aa25.02■■□□□ 1.6
LSM6-202ENST00000502781 ADAMTSL4Q6UY14 1074 aa25.02■■□□□ 1.6
LSM6-202ENST00000502781 GLT6D1Q7Z4J2 308 aa25.02■■□□□ 1.6
LSM6-202ENST00000502781 BRSK1Q8TDC3 778 aa25.02■■□□□ 1.6
LSM6-202ENST00000502781 GRK7Q8WTQ7 553 aa25.02■■□□□ 1.6
LSM6-202ENST00000502781 AGAP2Q99490 1192 aa25.02■■□□□ 1.6
LSM6-202ENST00000502781 LGR4Q9BXB1 951 aa25.02■■□□□ 1.6
LSM6-202ENST00000502781 DDX47Q9H0S4 455 aaKnown RBP25.02■■□□□ 1.6
LSM6-202ENST00000502781 PNMA8BQ9ULN7 279 aaPredicted RBP25.02■■□□□ 1.6
LSM6-202ENST00000502781 YKT6O15498 198 aa25.01■■□□□ 1.59
LSM6-202ENST00000502781 CD59P13987 128 aa25.01■■□□□ 1.59
LSM6-202ENST00000502781 NME1P15531 152 aaKnown RBP25.01■■□□□ 1.59
LSM6-202ENST00000502781 PAFAH1B1P43034 410 aa25.01■■□□□ 1.59
LSM6-202ENST00000502781 TRIP13Q15645 432 aaPredicted RBP25.01■■□□□ 1.59
LSM6-202ENST00000502781 KCTD19Q17RG1 926 aaPredicted RBP25.01■■□□□ 1.59
LSM6-202ENST00000502781 RSPO4Q2I0M5 234 aaPredicted RBP25.01■■□□□ 1.59
LSM6-202ENST00000502781 HEATR4Q86WZ0 1026 aa25.01■■□□□ 1.59
LSM6-202ENST00000502781 C19orf43Q9BQ61 176 aa25.01■■□□□ 1.59
LSM6-202ENST00000502781 DLL3Q9NYJ7 618 aa25.01■■□□□ 1.59
LSM6-202ENST00000502781 TMEM131Q92545 1883 aa25.01■■□□□ 1.59
LSM6-202ENST00000502781 E7EVH7 732 aa25■■□□□ 1.59
LSM6-202ENST00000502781 PPFIA2O75334 1257 aa25■■□□□ 1.59
LSM6-202ENST00000502781 CSF2P04141 144 aa25■■□□□ 1.59
LSM6-202ENST00000502781 APRTP07741 180 aa25■■□□□ 1.59
LSM6-202ENST00000502781 MYCLP1P12525 358 aaPredicted RBP25■■□□□ 1.59
LSM6-202ENST00000502781 SDHBP21912 280 aa25■■□□□ 1.59
LSM6-202ENST00000502781 EPHA8P29322 1005 aaPredicted RBP25■■□□□ 1.59
LSM6-202ENST00000502781 MAGEA6P43360 314 aa25■■□□□ 1.59
LSM6-202ENST00000502781 GPR1P46091 355 aa25■■□□□ 1.59
LSM6-202ENST00000502781 CDK3Q00526 305 aa25■■□□□ 1.59
LSM6-202ENST00000502781 CDH17Q12864 832 aa25■■□□□ 1.59
LSM6-202ENST00000502781 KANSL1Q7Z3B3 1105 aa25■■□□□ 1.59
LSM6-202ENST00000502781 DTX3LQ8TDB6 740 aa25■■□□□ 1.59
LSM6-202ENST00000502781 SAP25Q8TEE9 199 aa25■■□□□ 1.59
LSM6-202ENST00000502781 PLEKHG4BQ96PX9 1271 aa25■■□□□ 1.59
LSM6-202ENST00000502781 KLF15Q9UIH9 416 aa25■■□□□ 1.59
LSM6-202ENST00000502781 CDV3Q9UKY7 258 aaKnown RBP25■■□□□ 1.59
LSM6-202ENST00000502781 TP53BP1Q12888 1972 aaPredicted RBP24.99■■□□□ 1.59
LSM6-202ENST00000502781 CCDC188H7C350 402 aa24.99■■□□□ 1.59
LSM6-202ENST00000502781 CACNB4O00305 520 aaPredicted RBP24.99■■□□□ 1.59
LSM6-202ENST00000502781 ECEL1O95672 775 aa24.99■■□□□ 1.59
LSM6-202ENST00000502781 GAS8O95995 478 aa24.99■■□□□ 1.59
LSM6-202ENST00000502781 SLC4A1P02730 911 aa24.99■■□□□ 1.59
LSM6-202ENST00000502781 HTR1BP28222 390 aa24.99■■□□□ 1.59
LSM6-202ENST00000502781 GRIA1P42261 906 aa24.99■■□□□ 1.59
LSM6-202ENST00000502781 BASP1P80723 227 aaKnown RBP24.99■■□□□ 1.59
LSM6-202ENST00000502781 UAP1L1Q3KQV9 507 aa24.99■■□□□ 1.59
LSM6-202ENST00000502781 ZDHHC20Q5W0Z9 365 aa24.99■■□□□ 1.59
LSM6-202ENST00000502781 OR52K1Q8NGK4 314 aa24.99■■□□□ 1.59
LSM6-202ENST00000502781 WDR92Q96MX6 357 aa24.99■■□□□ 1.59
LSM6-202ENST00000502781 CASS4Q9NQ75 786 aa24.99■■□□□ 1.59
LSM6-202ENST00000502781 PHPT1Q9NRX4 125 aaPredicted RBP24.99■■□□□ 1.59
LSM6-202ENST00000502781 CNOT6Q9ULM6 557 aaKnown RBP24.99■■□□□ 1.59
LSM6-202ENST00000502781 ARL5AQ9Y689 179 aa24.99■■□□□ 1.59
LSM6-202ENST00000502781 DMXL1Q9Y485 3027 aa24.99■■□□□ 1.59
LSM6-202ENST00000502781 DNAH14Q0VDD8 3507 aa24.98■■□□□ 1.59
LSM6-202ENST00000502781 TMEM202A6NGA9 273 aa24.98■■□□□ 1.59
LSM6-202ENST00000502781 FADS2P1A8MWK0 482 aa24.98■■□□□ 1.59
LSM6-202ENST00000502781 TNFRSF10CO14798 259 aa24.98■■□□□ 1.59
LSM6-202ENST00000502781 TUBB4AP04350 444 aa24.98■■□□□ 1.59
LSM6-202ENST00000502781 TPSB2P20231 275 aa24.98■■□□□ 1.59
LSM6-202ENST00000502781 LPOP22079 712 aaPredicted RBP24.98■■□□□ 1.59
LSM6-202ENST00000502781 PTGIRP43119 386 aa24.98■■□□□ 1.59
LSM6-202ENST00000502781 GPS1Q13098 491 aa24.98■■□□□ 1.59
LSM6-202ENST00000502781 TPSAB1Q15661 275 aa24.98■■□□□ 1.59
LSM6-202ENST00000502781 TRAM1L1Q8N609 369 aa24.98■■□□□ 1.59
LSM6-202ENST00000502781 COX14Q96I36 57 aa24.98■■□□□ 1.59
LSM6-202ENST00000502781 ZSCAN5AQ9BUG6 496 aa24.98■■□□□ 1.59
LSM6-202ENST00000502781 CAAP1Q9H8G2 361 aa24.98■■□□□ 1.59
LSM6-202ENST00000502781 BPIFA1Q9NP55 256 aa24.98■■□□□ 1.59
LSM6-202ENST00000502781 IL26Q9NPH9 171 aa24.98■■□□□ 1.59
LSM6-202ENST00000502781 DNAJC28Q9NX36 388 aa24.98■■□□□ 1.59
LSM6-202ENST00000502781 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.98■■□□□ 1.59
LSM6-202ENST00000502781 C2orf81A6NN90 581 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 LDB2O43679 373 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 BUD23O43709 281 aaKnown RBP24.97■■□□□ 1.59
LSM6-202ENST00000502781 CRTAMO95727 393 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 TPH1P17752 444 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 KELP23276 732 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 LMAN1P49257 510 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 CDK16Q00536 496 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 PDE1BQ01064 536 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 BNIP3Q12983 259 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 KCNJ11Q14654 390 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 ZNF542PQ5EBM4 170 aa24.97■■□□□ 1.59
LSM6-202ENST00000502781 PDPK2PQ6A1A2 396 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms