RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 TBC1D3DA0A087WVF3 549 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 TBC1D3IA0A087WXS9 549 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 TBC1D3EA0A087X179 549 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 TBC1D3KA0A087X1G2 549 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 TRGV8A0A0C4DH27 118 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 TMEM238LA0A1B0GVL6 79 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 TBC1D3FA6NER0 549 aaPredicted RBP5.22□□□□□ -1.57
FXN-205ENST00000498653 TBC1D3LB9A6J9 549 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 LMO7DNF2Z398 122 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 GABRDO14764 452 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 MED7O43513 233 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 NRDCO43847 1150 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 MFAP3LO75121 409 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 CREG1O75629 220 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 STK17BO94768 372 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 GFPT2O94808 682 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 PAEPP09466 180 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 PDGFRBP09619 1106 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 TBC1D3HP0C7X1 549 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 PNMA6AP0CW24 399 aaPredicted RBP5.22□□□□□ -1.57
FXN-205ENST00000498653 VDRP11473 427 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 CD19P15391 556 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 PRLRP16471 622 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 PTPN1P18031 435 aaKnown RBP5.22□□□□□ -1.57
FXN-205ENST00000498653 EPHA1P21709 976 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 GNA15P30679 374 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 GSTT1P30711 240 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 DRD3P35462 400 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 CA7P43166 264 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 GLRBP48167 497 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 TDGF1P3P51864 188 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 CLDN2P57739 230 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 TSPY1Q01534 308 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 ARID5AQ03989 594 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 GOLGA8FQ08AF8 430 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 GOLGA8DPQ0D2H9 430 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 KLHL30Q0D2K2 578 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 INCA1Q0VD86 236 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 ZNF394Q53GI3 561 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 SETMARQ53H47 684 aaPredicted RBP5.22□□□□□ -1.57
FXN-205ENST00000498653 RPS26P11Q5JNZ5 115 aaPredicted RBP5.22□□□□□ -1.57
FXN-205ENST00000498653 DCAF12Q5T6F0 453 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 TBC1D3GQ6DHY5 549 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 TBC1D3CQ6IPX1 549 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 ESRP1Q6NXG1 681 aaKnown RBP5.22□□□□□ -1.57
FXN-205ENST00000498653 HTR3DQ70Z44 454 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 CCDC186Q7Z3E2 898 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 PARGQ86W56 976 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 OSTM1Q86WC4 334 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 HIPK1Q86Z02 1210 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 FAM71AQ8IYT1 594 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 DCP1BQ8IZD4 617 aaKnown RBP5.22□□□□□ -1.57
FXN-205ENST00000498653 TBC1D3Q8IZP1 549 aaPredicted RBP5.22□□□□□ -1.57
FXN-205ENST00000498653 Q8N9G6 341 aaPredicted RBP5.22□□□□□ -1.57
FXN-205ENST00000498653 FAR1Q8WVX9 515 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 SYN2Q92777 582 aaPredicted RBP5.22□□□□□ -1.57
FXN-205ENST00000498653 RMND5BQ96G75 393 aaPredicted RBP5.22□□□□□ -1.57
FXN-205ENST00000498653 PDLIM2Q96JY6 352 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 TNIP3Q96KP6 325 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 CCDC74BQ96LY2 380 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 PANX2Q96RD6 677 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 DNAJC7Q99615 494 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 OMDQ99983 421 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 SYT15Q9BQS2 421 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 TRIM56Q9BRZ2 755 aaKnown RBP5.22□□□□□ -1.57
FXN-205ENST00000498653 LRRC61Q9BV99 259 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 NT5C1AQ9BXI3 368 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 ELOVL4Q9GZR5 314 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 CLPBQ9H078 707 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 SOX17Q9H6I2 414 aaPredicted RBP5.22□□□□□ -1.57
FXN-205ENST00000498653 RDH14Q9HBH5 336 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 DDX43Q9NXZ2 648 aaKnown RBP5.22□□□□□ -1.57
FXN-205ENST00000498653 AIPL1Q9NZN9 384 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 AKAP7Q9P0M2 348 aaPredicted RBP5.22□□□□□ -1.57
FXN-205ENST00000498653 APPL1Q9UKG1 709 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 CDH9Q9ULB4 789 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 KIAA1257Q9ULG3 409 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 CNTN6Q9UQ52 1028 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 BTRCQ9Y297 605 aa5.22□□□□□ -1.57
FXN-205ENST00000498653 TRPM6Q9BX84 2022 aa5.21□□□□□ -1.57
FXN-205ENST00000498653 IGHV5-10-1A0A0J9YXX1 117 aa5.21□□□□□ -1.58
FXN-205ENST00000498653 SPTY2D1-AS1A0A0U1RR47 76 aa5.21□□□□□ -1.58
FXN-205ENST00000498653 KDM4EB2RXH2 506 aaPredicted RBP5.21□□□□□ -1.58
FXN-205ENST00000498653 B4E171 279 aa5.21□□□□□ -1.58
FXN-205ENST00000498653 FAM229AH3BQW9 127 aa5.21□□□□□ -1.58
FXN-205ENST00000498653 YY2O15391 372 aa5.21□□□□□ -1.58
FXN-205ENST00000498653 THAP12O43422 761 aa5.21□□□□□ -1.58
FXN-205ENST00000498653 PLRG1O43660 514 aaKnown RBP5.21□□□□□ -1.58
FXN-205ENST00000498653 RNGTTO60942 597 aaKnown RBP5.21□□□□□ -1.58
FXN-205ENST00000498653 CTAG2O75638 210 aa5.21□□□□□ -1.58
FXN-205ENST00000498653 TMEM63AO94886 807 aa5.21□□□□□ -1.58
FXN-205ENST00000498653 SLCO2B1O94956 709 aa5.21□□□□□ -1.58
FXN-205ENST00000498653 ZWINTO95229 277 aa5.21□□□□□ -1.58
FXN-205ENST00000498653 RECKO95980 971 aa5.21□□□□□ -1.58
FXN-205ENST00000498653 SERPING1P05155 500 aa5.21□□□□□ -1.58
FXN-205ENST00000498653 SKILP12757 684 aa5.21□□□□□ -1.58
FXN-205ENST00000498653 GOT1P17174 413 aa5.21□□□□□ -1.58
FXN-205ENST00000498653 TNFAIP3P21580 790 aa5.21□□□□□ -1.58
FXN-205ENST00000498653 ACAT1P24752 427 aaKnown RBP5.21□□□□□ -1.58
FXN-205ENST00000498653 LMO2P25791 158 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms