RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, human

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCG5-209	ENST00000498607	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	11.64	□□□□□ -0.55
SCG5-209	ENST00000498607	SERGEF	Q9UGK8	458 aa		11.64	□□□□□ -0.55
SCG5-209	ENST00000498607	FKBPL	Q9UIM3	349 aa		11.64	□□□□□ -0.55
SCG5-209	ENST00000498607	SIT1	Q9Y3P8	196 aa		11.64	□□□□□ -0.55
SCG5-209	ENST00000498607	TECTA	O75443	2155 aa		11.64	□□□□□ -0.55
SCG5-209	ENST00000498607	TRPM6	Q9BX84	2022 aa		11.64	□□□□□ -0.55
SCG5-209	ENST00000498607	PRUNE2	Q8WUY3	3088 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	RGSL1	A5PLK6	1076 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	RASGRF2	O14827	1237 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	RNASEH2A	O75792	299 aa	Known RBP	11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	GOT2	P00505	430 aa	Known RBP	11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	ACADM	P11310	421 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	BPI	P17213	487 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	SPAM1	P38567	509 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	SPINT3	P49223	89 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	TAS2R38	P59533	333 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	DCDC1	P59894	354 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	TMPRSS15	P98073	1019 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	XIAP	P98170	497 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	PTS	Q03393	145 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	ZNF844	Q08AG5	666 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	RASA2	Q15283	850 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	HSP90AA5P	Q58FG0	334 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	NEPRO	Q6NW34	567 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	HSD11B1L	Q7Z5J1	315 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	LRRC6	Q86X45	466 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	TDRP	Q86YL5	185 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	CNTN4	Q8IWV2	1026 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	CTAGE3P	Q8IX95	158 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	LMNTD2	Q8IXW0	634 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	PPM1N	Q8N819	430 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	TSTD1	Q8NFU3	115 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	SLC44A1	Q8WWI5	657 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	PLEKHG4B	Q96PX9	1271 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	PAFAH2	Q99487	392 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	CDH19	Q9H159	772 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	ROPN1	Q9HAT0	212 aa	Predicted RBP	11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	NSMCE4A	Q9NXX6	385 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	IL1RAPL1	Q9NZN1	696 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	SLC24A2	Q9UI40	661 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	NCKAP1	Q9Y2A7	1128 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	NUMA1	Q14980	2115 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	EYS	Q5T1H1	3165 aa		11.63	□□□□□ -0.55
SCG5-209	ENST00000498607	CXorf49	A8MYA2	514 aa	Predicted RBP	11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	POC1B-GALNT4	F8VUJ3	575 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	GAPDHS	O14556	408 aa	Predicted RBP	11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	PLRG1	O43660	514 aa	Known RBP	11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	INHBA	P08476	426 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	OGN	P20774	298 aa	Known RBP	11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	FOXN2	P32314	431 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	LIG3	P49916	1009 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	CREB5	Q02930	508 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	CACNG1	Q06432	222 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	ACOX1	Q15067	660 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	SMAD1	Q15797	465 aa	Known RBP	11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	KRT71	Q3SY84	523 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	CEP85L	Q5SZL2	805 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	TEDDM1	Q5T9Z0	273 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	CWF19L1	Q69YN2	538 aa	Known RBP	11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	ZNF470	Q6ECI4	717 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	KIAA0408	Q6ZU52	694 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	CYP2U1	Q7Z449	544 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	TECPR1	Q7Z6L1	1165 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	SLC26A11	Q86WA9	606 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	NRSN1	Q8IZ57	195 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	RIBC1	Q8N443	379 aa	Predicted RBP	11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	OTUD6B	Q8N6M0	293 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	GPR26	Q8NDV2	337 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	GPR150	Q8NGU9	434 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	OR4L1	Q8NH43	312 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	CXorf40A	Q8TE69	158 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	SCG3	Q8WXD2	468 aa	Known RBP	11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	PKNOX2	Q96KN3	472 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	COQ10A	Q96MF6	247 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	HHIP	Q96QV1	700 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	CPNE1	Q99829	537 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	DHRS4	Q9BTZ2	278 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	WRAP53	Q9BUR4	548 aa	Known RBP	11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	IL26	Q9NPH9	171 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	IARS2	Q9NSE4	1012 aa	Known RBP	11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	CATSPERZ	Q9NTU4	200 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	C2orf42	Q9NWW7	574 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	USP36	Q9P275	1121 aa	Known RBP	11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	APPL1	Q9UKG1	709 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	FBXO5	Q9UKT4	447 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	SLC30A1	Q9Y6M5	507 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	PLXNB3	Q9ULL4	1909 aa		11.62	□□□□□ -0.55
SCG5-209	ENST00000498607	GLYATL1P3	A0A0U1RQE8	302 aa		11.61	□□□□□ -0.55
SCG5-209	ENST00000498607	OR51F1	A6NGY5	319 aa		11.61	□□□□□ -0.55
SCG5-209	ENST00000498607	GOLGA8K	D6RF30	607 aa		11.61	□□□□□ -0.55
SCG5-209	ENST00000498607	GOLGA8T	H3BQL2	631 aa		11.61	□□□□□ -0.55
SCG5-209	ENST00000498607	WNT9A	O14904	365 aa		11.61	□□□□□ -0.55
SCG5-209	ENST00000498607	MMP20	O60882	483 aa		11.61	□□□□□ -0.55
SCG5-209	ENST00000498607	CDH16	O75309	829 aa		11.61	□□□□□ -0.55

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