RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 SERPINI2O75830 405 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 CCNDBP1O95273 360 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 TBX6O95947 436 aaPredicted RBP2.44□□□□□ -2.02
RBM39-242ENST00000498280 SCGB1D1O95968 90 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 ACADMP11310 421 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 LAMP2P13473 410 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 RARGP13631 454 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 AGAP20933 346 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 PSMA4P25789 261 aaKnown RBP2.44□□□□□ -2.02
RBM39-242ENST00000498280 SSTR2P30874 369 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 CDAP32320 146 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 ARL3P36405 182 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 PIGAP37287 484 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 GABRB2P47870 512 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 NOVP48745 357 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 F2RL1P55085 397 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 ARF3P61204 181 aaPredicted RBP2.44□□□□□ -2.02
RBM39-242ENST00000498280 ARF1P84077 181 aaKnown RBP2.44□□□□□ -2.02
RBM39-242ENST00000498280 SORDQ00796 357 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 ITGADQ13349 1161 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 MAMLD1Q13495 774 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 DHX34Q14147 1143 aaKnown RBP2.44□□□□□ -2.02
RBM39-242ENST00000498280 EIF4A2Q14240 407 aaKnown RBP2.44□□□□□ -2.02
RBM39-242ENST00000498280 RBBP5Q15291 538 aaKnown RBP2.44□□□□□ -2.02
RBM39-242ENST00000498280 CCNG2Q16589 344 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 TCTN1Q2MV58 587 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 DPCR1Q3MIW9 517 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 SGO1Q5FBB7 561 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 LCE3AQ5TA76 89 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 FAM205BPQ63HN1 556 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 ITPRIPL1Q6GPH6 555 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 MZT2BQ6NZ67 158 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 QSOX2Q6ZRP7 698 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 IKBIPQ70UQ0 350 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 HAPLN4Q86UW8 402 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 SFTPA2Q8IWL1 248 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 PDILTQ8N807 584 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 FRMD1Q8N878 549 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 LMNTD1Q8N9Z9 388 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 KBTBD3Q8NAB2 608 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 TMEM163Q8TC26 289 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 CREB3L4Q8TEY5 395 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 USP6NLQ92738 828 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 SMARCE1Q969G3 411 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 FAM149B1Q96BN6 582 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 FBXL8Q96CD0 374 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 MMABQ96EY8 250 aaPredicted RBP2.44□□□□□ -2.02
RBM39-242ENST00000498280 TXNDC15Q96J42 360 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 SDF4Q9BRK5 362 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 STRA6Q9BX79 667 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 FTOQ9C0B1 505 aaKnown RBP eCLIP2.44□□□□□ -2.02
RBM39-242ENST00000498280 EGLN1Q9GZT9 426 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 MUC13Q9H3R2 512 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 PRKRIP1Q9H875 184 aaPredicted RBP2.44□□□□□ -2.02
RBM39-242ENST00000498280 FBRSL1Q9HCM7 1045 aaKnown RBP2.44□□□□□ -2.02
RBM39-242ENST00000498280 EIF2B3Q9NR50 452 aaKnown RBP2.44□□□□□ -2.02
RBM39-242ENST00000498280 SMYD2Q9NRG4 433 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 TMEM51Q9NW97 253 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 CISD1Q9NZ45 108 aaKnown RBP2.44□□□□□ -2.02
RBM39-242ENST00000498280 ABI3Q9P2A4 366 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 SLCO3A1Q9UIG8 710 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 HAO1Q9UJM8 370 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 GAB2Q9UQC2 676 aa2.44□□□□□ -2.02
RBM39-242ENST00000498280 AAR2Q9Y312 384 aaKnown RBP2.44□□□□□ -2.02
RBM39-242ENST00000498280 SRPRBQ9Y5M8 271 aaKnown RBP2.44□□□□□ -2.02
RBM39-242ENST00000498280 COL2A1P02458 1487 aaPredicted RBP2.44□□□□□ -2.02
RBM39-242ENST00000498280 IGLV5-37A0A075B6J1 123 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 LIPT2A6NK58 231 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 TTC36A6NLP5 189 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 AP3D1O14617 1153 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 CLGNO14967 610 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 HNRNPCL1O60812 293 aaKnown RBP2.43□□□□□ -2.02
RBM39-242ENST00000498280 GFPT2O94808 682 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 NKX2-2O95096 273 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 EIF2S1P05198 315 aaKnown RBP2.43□□□□□ -2.02
RBM39-242ENST00000498280 MMP2P08253 660 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 CYC1P08574 325 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 AMD1P17707 334 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 AZU1P20160 251 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 MYF6P23409 242 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 PPARGP37231 505 aaPredicted RBP2.43□□□□□ -2.02
RBM39-242ENST00000498280 HADHAP40939 763 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 CASP2P42575 452 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 DRG2P55039 364 aaKnown RBP2.43□□□□□ -2.02
RBM39-242ENST00000498280 BRWD1-AS2P59051 145 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 ERVK11-1P61568 191 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 C2orf68Q2NKX9 166 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 MMEL1Q495T6 779 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 CXorf66Q5JRM2 361 aaPredicted RBP2.43□□□□□ -2.02
RBM39-242ENST00000498280 TYW3Q6IPR3 259 aaKnown RBP2.43□□□□□ -2.02
RBM39-242ENST00000498280 ANKRD54Q6NXT1 300 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 NCEH1Q6PIU2 408 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 KLHL24Q6TFL4 600 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 CLEC4GQ6UXB4 293 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 PCGF5Q86SE9 256 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 PATL1Q86TB9 770 aaKnown RBP2.43□□□□□ -2.02
RBM39-242ENST00000498280 KRTAP7-1Q8IUC3 87 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 CCDC13Q8IYE1 715 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 CCDC105Q8IYK2 499 aa2.43□□□□□ -2.02
RBM39-242ENST00000498280 WDTC1Q8N5D0 677 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms