RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 TIMP2P16035 220 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 ZNF30P17039 623 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 NTSR1P30989 418 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 ARSDP51689 593 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 PRAMEP78395 509 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 MRPS21P82921 87 aaKnown RBP14.17□□□□□ -0.14
VPS26A-209ENST00000497564 ILF2Q12905 390 aaKnown RBP14.17□□□□□ -0.14
VPS26A-209ENST00000497564 DNAJC3Q13217 504 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 THOC5Q13769 683 aaKnown RBP14.17□□□□□ -0.14
VPS26A-209ENST00000497564 LPAL2Q16609 132 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 UGP2Q16851 508 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 GRTP1Q5TC63 336 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 LGSNQ5TDP6 509 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 NEPROQ6NW34 567 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 TAOK1Q7L7X3 1001 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 LYSMD3Q7Z3D4 306 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 TRMT11Q7Z4G4 463 aaKnown RBP14.17□□□□□ -0.14
VPS26A-209ENST00000497564 TRABD2AQ86V40 505 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 DCLK2Q8N568 766 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 C2CD4AQ8NCU7 369 aaPredicted RBP14.17□□□□□ -0.14
VPS26A-209ENST00000497564 OR4K2Q8NGD2 314 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 PIP4K2CQ8TBX8 421 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 HDAC10Q969S8 669 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 MTBPQ96DY7 904 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 PPP1R16AQ96I34 528 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 TBATAQ96M53 351 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 AGAP2Q99490 1192 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 GPR63Q9BZJ6 419 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 FBRSQ9HAH7 460 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 UGT1A7Q9HAW7 530 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 UGT1A10Q9HAW8 530 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 UGT1A8Q9HAW9 530 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 ZFYVE1Q9HBF4 777 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 IARS2Q9NSE4 1012 aaKnown RBP14.17□□□□□ -0.14
VPS26A-209ENST00000497564 IL1RAPL1Q9NZN1 696 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 BCCIPQ9P287 314 aaKnown RBP eCLIP14.17□□□□□ -0.14
VPS26A-209ENST00000497564 TBK1Q9UHD2 729 aa14.17□□□□□ -0.14
VPS26A-209ENST00000497564 NOVA2Q9UNW9 492 aaKnown RBP14.17□□□□□ -0.14
VPS26A-209ENST00000497564 C1orf232A0A0U1RR37 186 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 CCDC162PA2VCL2 907 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 NPIPB15A6NHN6 443 aaPredicted RBP14.16□□□□□ -0.14
VPS26A-209ENST00000497564 C1QTNF3-AMACRE9PGA6 284 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 KRT37O76014 449 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 SNRPAP09012 282 aaKnown RBP14.16□□□□□ -0.14
VPS26A-209ENST00000497564 OGNP20774 298 aaKnown RBP14.16□□□□□ -0.14
VPS26A-209ENST00000497564 MAGOHP61326 146 aaKnown RBP14.16□□□□□ -0.14
VPS26A-209ENST00000497564 HSF5Q4G112 596 aaPredicted RBP14.16□□□□□ -0.14
VPS26A-209ENST00000497564 FBXO43Q4G163 708 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 KCTD16Q68DU8 428 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 AFTPHQ6ULP2 937 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 CRTC1Q6UUV9 634 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 TIFABQ6ZNK6 161 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 DPPA4Q7L190 304 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 PARS2Q7L3T8 475 aaKnown RBP14.16□□□□□ -0.14
VPS26A-209ENST00000497564 EXOC3L1Q86VI1 746 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 RAVER1Q8IY67 606 aaKnown RBP14.16□□□□□ -0.14
VPS26A-209ENST00000497564 CHPFQ8IZ52 775 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 CBARPQ8N350 705 aaPredicted RBP14.16□□□□□ -0.14
VPS26A-209ENST00000497564 OR4L1Q8NH43 312 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 EID2BQ96D98 161 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 MRRFQ96E11 262 aaKnown RBP14.16□□□□□ -0.14
VPS26A-209ENST00000497564 RBBP8Q99708 897 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 FAM126AQ9BYI3 521 aaPredicted RBP14.16□□□□□ -0.14
VPS26A-209ENST00000497564 RSPH9Q9H1X1 276 aaPredicted RBP14.16□□□□□ -0.14
VPS26A-209ENST00000497564 TXNDC16Q9P2K2 825 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 SLC17A6Q9P2U8 582 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 SARDHQ9UL12 918 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 SMG5Q9UPR3 1016 aaKnown RBP14.16□□□□□ -0.14
VPS26A-209ENST00000497564 PKP3Q9Y446 797 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 PSAT1Q9Y617 370 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 EML5Q05BV3 1969 aa14.16□□□□□ -0.14
VPS26A-209ENST00000497564 DOCK9Q9BZ29 2069 aa14.15□□□□□ -0.14
VPS26A-209ENST00000497564 KPNA3O00505 521 aaPredicted RBP14.15□□□□□ -0.14
VPS26A-209ENST00000497564 BUD23O43709 281 aaKnown RBP14.15□□□□□ -0.14
VPS26A-209ENST00000497564 VIPR1P32241 457 aa14.15□□□□□ -0.14
VPS26A-209ENST00000497564 SPRP35270 261 aaPredicted RBP14.15□□□□□ -0.14
VPS26A-209ENST00000497564 TIE1P35590 1138 aa14.15□□□□□ -0.14
VPS26A-209ENST00000497564 LEPRP48357 1165 aaKnown RBP14.15□□□□□ -0.14
VPS26A-209ENST00000497564 LIMK2P53671 638 aa14.15□□□□□ -0.14
VPS26A-209ENST00000497564 PTPRCAPQ14761 206 aa14.15□□□□□ -0.14
VPS26A-209ENST00000497564 PTPRRQ15256 657 aa14.15□□□□□ -0.14
VPS26A-209ENST00000497564 FAM46CQ5VWP2 391 aa14.15□□□□□ -0.14
VPS26A-209ENST00000497564 STRA8Q7Z7C7 330 aa14.15□□□□□ -0.14
VPS26A-209ENST00000497564 CILP2Q8IUL8 1156 aa14.15□□□□□ -0.14
VPS26A-209ENST00000497564 OR6P1Q8NGX9 317 aa14.15□□□□□ -0.14
VPS26A-209ENST00000497564 ISL2Q96A47 359 aa14.15□□□□□ -0.14
VPS26A-209ENST00000497564 ARRDC3Q96B67 414 aa14.15□□□□□ -0.14
VPS26A-209ENST00000497564 HDAC8Q9BY41 377 aa14.15□□□□□ -0.14
VPS26A-209ENST00000497564 RHOJQ9H4E5 214 aa14.15□□□□□ -0.14
VPS26A-209ENST00000497564 PCDH12Q9NPG4 1184 aa14.15□□□□□ -0.14
VPS26A-209ENST00000497564 NFKBIL1Q9UBC1 381 aaPredicted RBP14.15□□□□□ -0.14
VPS26A-209ENST00000497564 B4GALT6Q9UBX8 382 aa14.15□□□□□ -0.14
VPS26A-209ENST00000497564 FBXO5Q9UKT4 447 aa14.15□□□□□ -0.14
VPS26A-209ENST00000497564 HMX2A2RU54 273 aa14.14□□□□□ -0.15
VPS26A-209ENST00000497564 TRIM49D1C9J1S8 452 aa14.14□□□□□ -0.15
VPS26A-209ENST00000497564 GOLGA8TH3BQL2 631 aa14.14□□□□□ -0.15
VPS26A-209ENST00000497564 CD3EAPO15446 510 aaKnown RBP14.14□□□□□ -0.15
VPS26A-209ENST00000497564 ADAM23O75077 832 aa14.14□□□□□ -0.15
VPS26A-209ENST00000497564 ATG13O75143 517 aa14.14□□□□□ -0.15
VPS26A-209ENST00000497564 CLDN7O95471 211 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms