RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 CTBSQ01459 385 aa16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 AMZ1Q400G9 498 aa16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 RAET1GQ6H3X3 334 aa16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 NYAP1Q6ZVC0 841 aa16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 Q6ZVL8 140 aa16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 PRICKLE2Q7Z3G6 844 aa16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 TMPRSS9Q7Z410 1059 aa16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 TECPR1Q7Z6L1 1165 aa16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 NRSN1Q8IZ57 195 aa16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 FATE1Q969F0 183 aa16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 CATSPER2Q96P56 530 aa16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 ZPBPQ9BS86 351 aa16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 FUCA2Q9BTY2 467 aa16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 EFHD1Q9BUP0 239 aa16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 ISCUQ9H1K1 167 aa16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 RDH14Q9HBH5 336 aa16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 PDP2Q9P2J9 529 aa16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 BZW2Q9Y6E2 419 aaKnown RBP16.79■□□□□ 0.28
TRAPPC3-207ENST00000497251 LRRC53A6NM62 1247 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 SUV39H1O43463 412 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 FUCA1P04066 466 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 CA4P22748 312 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 GPR1P46091 355 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 ZNF165P49910 485 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 MAZP56270 477 aaKnown RBP16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 RPL26P61254 145 aaKnown RBP16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 KLHL30Q0D2K2 578 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 TBR1Q16650 682 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 TMEM71Q6P5X7 295 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 SLC30A9Q6PML9 568 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 ZNF574Q6ZN55 896 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 ZNF571Q7Z3V5 609 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 HSD11B1LQ7Z5J1 315 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 NAGSQ8N159 534 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 PELI3Q8N2H9 469 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 TEX26Q8N6G2 289 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 NIPA2Q8N8Q9 360 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 AVL9Q8NBF6 648 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 SH3KBP1Q96B97 665 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 ZNF653Q96CK0 615 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 NSMCE3Q96MG7 304 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 CSPG4P5Q96PW8 444 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 OR2M4Q96R27 311 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 SLC25A18Q9H1K4 315 aa16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 RPL26L1Q9UNX3 145 aaKnown RBP16.78■□□□□ 0.28
TRAPPC3-207ENST00000497251 IGHV1OR21-1A0A087WYE8 117 aa16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 NPIPB15A6NHN6 443 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 TERTO14746 1132 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 ATMINO43313 823 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 THRAP10827 490 aa16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 FGF3P11487 239 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 LHCGRP22888 699 aa16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 AMPD1P23109 780 aa16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 TRAF2Q12933 501 aa16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 DCAF12Q5T6F0 453 aa16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 PGBD5Q8N414 524 aa16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 OR10G6Q8NH81 332 aa16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 EXD1Q8NHP7 514 aa16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 PIH1D2Q8WWB5 315 aa16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 NKD1Q969G9 470 aa16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 AP2M1Q96CW1 435 aa16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 CCDC74BQ96LY2 380 aa16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 NUDT22Q9BRQ3 303 aa16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 POLR1EQ9GZS1 481 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 EPB41L1Q9H4G0 881 aa16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 STN1Q9H668 368 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 KCNK4Q9NYG8 393 aa16.77■□□□□ 0.28
TRAPPC3-207ENST00000497251 NBASA2RRP1 2371 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 DDX3XO00571 662 aaKnown RBP eCLIP16.76■□□□□ 0.272e-8■■■■■ 34.5
TRAPPC3-207ENST00000497251 PPM1DO15297 605 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 ARHGAP6O43182 974 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 FZD6O60353 706 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 CCL4P13236 92 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 SLC2A4P14672 509 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 AK4P27144 223 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 ACTR1BP42025 376 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 ACTR1AP61163 376 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 PYCR3Q53H96 274 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 FIGNQ5HY92 759 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 DENND2CQ68D51 928 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 ALG1LQ6GMV1 187 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 TIGD7Q6NT04 549 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 BORAQ6PGQ7 559 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 WDR74Q6RFH5 385 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 SFTPA2Q8IWL1 248 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 IL22RA1Q8N6P7 574 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 SLC12A9Q9BXP2 914 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 TRIM7Q9C029 511 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 TRIT1Q9H3H1 467 aaKnown RBP16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 RMI1Q9H9A7 625 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 VPS18Q9P253 973 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 IP6K2Q9UHH9 426 aa16.76■□□□□ 0.27
TRAPPC3-207ENST00000497251 SYCE3A1L190 88 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 RGSL1A5PLK6 1076 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 GOLGA6CA6NDK9 693 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 GOLGA6BA6NDN3 693 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 DUX1O43812 170 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 FAM87AP0C7U9 286 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 GOLGA6DP0CG33 693 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms