RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 FBXL17Q9UF56 701 aa4.82□□□□□ -1.64
VPS36-206ENST00000497149 TINAGQ9UJW2 476 aa4.82□□□□□ -1.64
VPS36-206ENST00000497149 R3HDM2Q9Y2K5 976 aaKnown RBP4.82□□□□□ -1.64
VPS36-206ENST00000497149 ARHGEF40Q8TER5 1519 aa4.82□□□□□ -1.64
VPS36-206ENST00000497149 IGLV5-52A0A0A0MRZ9 124 aa4.81□□□□□ -1.64
VPS36-206ENST00000497149 hCG_1807616A0A1W2PRN6 198 aa4.81□□□□□ -1.64
VPS36-206ENST00000497149 LINC01553A4QN01 128 aa4.81□□□□□ -1.64
VPS36-206ENST00000497149 DAB1O75553 588 aa4.81□□□□□ -1.64
VPS36-206ENST00000497149 RB1P06400 928 aa4.81□□□□□ -1.64
VPS36-206ENST00000497149 PRSS2P07478 247 aa4.81□□□□□ -1.64
VPS36-206ENST00000497149 CSH1P0DML2 217 aa4.81□□□□□ -1.64
VPS36-206ENST00000497149 CSH2P0DML3 217 aa4.81□□□□□ -1.64
VPS36-206ENST00000497149 PORP16435 677 aaPredicted RBP4.81□□□□□ -1.64
VPS36-206ENST00000497149 SSTR2P30874 369 aa4.81□□□□□ -1.64
VPS36-206ENST00000497149 HOXA13P31271 388 aaPredicted RBP4.81□□□□□ -1.64
VPS36-206ENST00000497149 HOXC9P31274 260 aa4.81□□□□□ -1.64
VPS36-206ENST00000497149 TAS2R40P59535 323 aa4.81□□□□□ -1.64
VPS36-206ENST00000497149 PLCB4Q15147 1175 aa4.81□□□□□ -1.64
VPS36-206ENST00000497149 ASTE1Q2TB18 679 aaPredicted RBP4.81□□□□□ -1.64
VPS36-206ENST00000497149 PLEKHS1Q5SXH7 462 aa4.81□□□□□ -1.64
VPS36-206ENST00000497149 KIAA0930Q6ICG6 404 aaPredicted RBP4.81□□□□□ -1.64
VPS36-206ENST00000497149 SLC36A4Q6YBV0 504 aa4.81□□□□□ -1.64
VPS36-206ENST00000497149 CLEC17AQ6ZS10 378 aa4.81□□□□□ -1.64
VPS36-206ENST00000497149 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.81□□□□□ -1.64
VPS36-206ENST00000497149 SRBD1Q8N5C6 995 aaKnown RBP4.81□□□□□ -1.64
VPS36-206ENST00000497149 HJURPQ8NCD3 748 aaPredicted RBP4.81□□□□□ -1.64
VPS36-206ENST00000497149 C1orf131Q8NDD1 294 aaKnown RBP4.81□□□□□ -1.64
VPS36-206ENST00000497149 ELMOD3Q96FG2 381 aa4.81□□□□□ -1.64
VPS36-206ENST00000497149 CWC15Q9P013 229 aaKnown RBP4.81□□□□□ -1.64
VPS36-206ENST00000497149 CACNA1IQ9P0X4 2223 aa4.81□□□□□ -1.64
VPS36-206ENST00000497149 CDRT15L2A8MXV6 281 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 SOCS6O14544 535 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 ATP2A1O14983 1001 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 PLRG1O43660 514 aaKnown RBP4.8□□□□□ -1.64
VPS36-206ENST00000497149 HS6ST1O60243 411 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 GJB3O75712 270 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 GAGE7O76087 117 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 NTN1O95631 604 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 ALPLP05186 524 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 GAGE12FP0CL80 117 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 GAGE12GP0CL81 117 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 GAGE12IP0CL82 117 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 ITGB8P26012 769 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 PRCPP42785 496 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 CAMPP49913 170 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 MRPS34P82930 218 aaKnown RBP4.8□□□□□ -1.64
VPS36-206ENST00000497149 ACSM2AQ08AH3 577 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 GAGE1Q13065 139 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 GAGE4Q13068 117 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 CHAF1BQ13112 559 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 IKQ13123 557 aaPredicted RBP4.8□□□□□ -1.64
VPS36-206ENST00000497149 HNRNPA0Q13151 305 aaKnown RBP4.8□□□□□ -1.64
VPS36-206ENST00000497149 PCGF3Q3KNV8 242 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 RAB41Q5JT25 222 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 PAPPA-AS1Q5QFB9 102 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 ACSM2BQ68CK6 577 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 DUS1LQ6P1R4 473 aaKnown RBP4.8□□□□□ -1.64
VPS36-206ENST00000497149 CFAP77Q6ZQR2 320 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 TSPAN33Q86UF1 283 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 HACE1Q8IYU2 909 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 PGBD5Q8N414 524 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 IQCF1Q8N6M8 205 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 WFIKKN2Q8TEU8 576 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 PHF21BQ96EK2 531 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 PLK3Q9H4B4 646 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 NOX4Q9NPH5 578 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 MTMR10Q9NXD2 777 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 OGFRQ9NZT2 677 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 SUCLA2Q9P2R7 463 aaPredicted RBP4.8□□□□□ -1.64
VPS36-206ENST00000497149 WNT16Q9UBV4 365 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 ACSL5Q9ULC5 683 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 NENFQ9UMX5 172 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 SNX9Q9Y5X1 595 aa4.8□□□□□ -1.64
VPS36-206ENST00000497149 A0A1W2PQ09 198 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 EGFP01133 1207 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 HIST1H2ABP04908 130 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 SRPRAP08240 638 aaKnown RBP4.79□□□□□ -1.64
VPS36-206ENST00000497149 ACAA1P09110 424 aaPredicted RBP4.79□□□□□ -1.64
VPS36-206ENST00000497149 IGHV4-30-4P0DP06 118 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 ZNF12P17014 697 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 HIST1H2ADP20671 130 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 UBA1P22314 1058 aaKnown RBP4.79□□□□□ -1.64
VPS36-206ENST00000497149 ACADLP28330 430 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 BDKRB2P30411 391 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 ACSL1P33121 698 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 ACTN2P35609 894 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 CDKN2AP42771 156 aaKnown RBP4.79□□□□□ -1.64
VPS36-206ENST00000497149 HNRNPH2P55795 449 aaKnown RBP4.79□□□□□ -1.64
VPS36-206ENST00000497149 CSNK2A1P68400 391 aaPredicted RBP4.79□□□□□ -1.64
VPS36-206ENST00000497149 EGR4Q05215 589 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 DDR1Q08345 913 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 EPS8Q12929 822 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 DHX34Q14147 1143 aaKnown RBP4.79□□□□□ -1.64
VPS36-206ENST00000497149 CTF1Q16619 201 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 PNLIPRP3Q17RR3 467 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 XKR9Q5GH70 373 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 WDR73Q6P4I2 378 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 PDXDC1Q6P996 788 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 KCTD18Q6PI47 426 aaPredicted RBP4.79□□□□□ -1.64
VPS36-206ENST00000497149 HIST3H2AQ7L7L0 130 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms