RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 CREMQ03060 361 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ART3Q13508 389 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 DDX39BQ13838 428 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 RRP1BQ14684 758 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 TARBP2Q15633 366 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC9B1Q4ZJI4 515 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 KLHDC7AQ5VTJ3 777 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 PLA2G4FQ68DD2 849 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ANKRD40Q6AI12 368 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 C3orf33Q6P1S2 294 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 LRRC8BQ6P9F7 803 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC36A4Q6YBV0 504 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 Q6ZUG5 572 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 TAF8Q7Z7C8 310 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 GPR149Q86SP6 731 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 C2CD5Q86YS7 1000 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 FAM217AQ8IXS0 508 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 SRRM1Q8IYB3 904 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 THNSL1Q8IYQ7 743 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 DCP1BQ8IZD4 617 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 TAGAPQ8N103 731 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 HDDC3Q8N4P3 179 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ZGPATQ8N5A5 531 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 MINDY2Q8NBR6 621 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 TGFBRAP1Q8WUH2 860 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 RFFLQ8WZ73 363 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 STAMQ92783 540 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 FAM89AQ96GI7 184 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 B3GALT6Q96L58 329 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 C7orf26Q96N11 449 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 TRNT1Q96Q11 434 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 DMRTA2Q96SC8 542 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 RAD9AQ99638 391 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 EDEM2Q9BV94 578 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 SPATA16Q9BXB7 569 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 TRIM54Q9BYV2 358 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 FTOQ9C0B1 505 aaKnown RBP eCLIP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 USP44Q9H0E7 712 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 NUP62CLQ9H1M0 184 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 NDST4Q9H3R1 872 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 TASP1Q9H6P5 420 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 EMC7Q9NPA0 242 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF275Q9NSD4 429 aaPredicted RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 LMBRD1Q9NUN5 540 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 AGPAT5Q9NUQ2 364 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ZSCAN32Q9NX65 697 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 MTMR4Q9NYA4 1195 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CPNE7Q9UBL6 633 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 DNAJB9Q9UBS3 223 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 LIMA1Q9UHB6 759 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 DCDC2Q9UHG0 476 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 TSPYL4Q9UJ04 414 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 DIMT1Q9UNQ2 313 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 PPIL1Q9Y3C6 166 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 LRRC42Q9Y546 428 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ATP23Q9Y6H3 246 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 PHLPP2Q6ZVD8 1323 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 WRNQ14191 1432 aaPredicted RBP eCLIP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 A0A0U1RQJ8 604 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 RNF103-CHMP3A0A140T963 221 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 OR6C70A6NIJ9 312 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 OR6C75A6NL08 312 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 LGALS16A8MUM7 142 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 RNF103O00237 685 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 UBE2CO00762 179 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 PSMA7O14818 248 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 KIAA0355O15063 1070 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 RNMTO43148 476 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 TADA2AO75478 443 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CRCPO75575 148 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CAMTA2O94983 1202 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 RASAL1O95294 804 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 FTCDO95954 541 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 IL1AP01583 271 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 APOC1P02654 83 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 AFPP02771 609 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 IFNA16P05015 189 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 TUBBP07437 444 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CHRM5P08912 532 aaPredicted RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ERVK-10P10266 1014 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 FDPSP14324 419 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ITGB6P18564 788 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CALB2P22676 271 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 TCEA1P23193 301 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 AHCYP23526 432 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 PON1P27169 355 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 HTR7P34969 479 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 IGFALSP35858 605 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 GPD2P43304 727 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 SLCO1A2P46721 670 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ALDH7A1P49419 539 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 LUMP51884 338 aaPredicted RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 PRELPP51888 382 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CTSWP56202 376 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 SPCS3P61009 180 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 TUBB4BP68371 445 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 IL13RA1P78552 427 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 IRF9Q00978 393 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 MC1RQ01726 317 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 YWHAHQ04917 246 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms