RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 LPCAT1Q8NF37 534 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 BHLHE22Q8NFJ8 381 aaPredicted RBP11.05□□□□□ -0.64
CMSS1-208ENST00000496116 MDGA1Q8NFP4 955 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 ZNF461Q8TAF7 563 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 SH3RF2Q8TEC5 729 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 LPGAT1Q92604 370 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 KIAA1191Q96A73 305 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 MYRFLQ96LU7 910 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 ATOH8Q96SQ7 321 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 UNC93B1Q9H1C4 597 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 EBF3Q9H4W6 596 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 MID1IP1Q9NPA3 183 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 ADA2Q9NZK5 511 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 PDP2Q9P2J9 529 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 RNF112Q9ULX5 631 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 FAM50BQ9Y247 325 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 SPO11Q9Y5K1 396 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 RAI2Q9Y5P3 530 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 CCDC189A1A4V9 331 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 UBXN8O00124 270 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 KLKB1P03952 638 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 HMGA1P17096 107 aaKnown RBP11.04□□□□□ -0.64
CMSS1-208ENST00000496116 TSPAN8P19075 237 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 DPP6P42658 865 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 PPP3CCP48454 512 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 PSMD8P48556 350 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 TTPAP49638 278 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 CDH13P55290 713 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 SH3BP2P78314 561 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 MRPS22P82650 360 aaKnown RBP11.04□□□□□ -0.64
CMSS1-208ENST00000496116 VEPH1Q14D04 833 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 CYTH1Q15438 398 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 OR4D1Q15615 310 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 DEFB115Q30KQ5 88 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 SFT2D3Q587I9 215 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 OGFRL1Q5TC84 451 aaPredicted RBP11.04□□□□□ -0.64
CMSS1-208ENST00000496116 RNF219Q5W0B1 726 aaPredicted RBP11.04□□□□□ -0.64
CMSS1-208ENST00000496116 REP15Q6BDI9 236 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 ZNF783Q6ZMS7 281 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 SPNS2Q8IVW8 549 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 NKAPQ8N5F7 415 aaKnown RBP11.04□□□□□ -0.64
CMSS1-208ENST00000496116 RNF148Q8N7C7 305 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 ASB9Q96DX5 294 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 CREBZFQ9NS37 354 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 CACNA2D2Q9NY47 1150 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 SUCOQ9UBS9 1254 aaKnown RBP11.04□□□□□ -0.64
CMSS1-208ENST00000496116 MTF2Q9Y483 593 aaPredicted RBP11.04□□□□□ -0.64
CMSS1-208ENST00000496116 GBF1Q92538 1859 aa11.04□□□□□ -0.64
CMSS1-208ENST00000496116 TYW5A2RUC4 315 aaKnown RBP11.03□□□□□ -0.64
CMSS1-208ENST00000496116 SUPT3HB4E1H0 165 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 ANKRD66B4E2M5 251 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 H3BMM5 538 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 AZIN1O14977 448 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 VPS26AO75436 327 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 SUPT3HO75486 399 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 PARNO95453 639 aaKnown RBP11.03□□□□□ -0.64
CMSS1-208ENST00000496116 C1RP00736 705 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 PRLP01236 227 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 LINGO3P0C6S8 592 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 IRF1P10914 325 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 MTHFD2P13995 350 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 PSMA3P25788 255 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 AQP4P55087 323 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 MS4A2Q01362 244 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 LRP8Q14114 963 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 TCTN1Q2MV58 587 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 AARS2Q5JTZ9 985 aaKnown RBP11.03□□□□□ -0.64
CMSS1-208ENST00000496116 TPGS2Q68CL5 300 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 PAQR3Q6TCH7 311 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 FBXO39Q8N4B4 442 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 TOP1MTQ969P6 601 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 TRMT2BQ96GJ1 504 aaKnown RBP11.03□□□□□ -0.64
CMSS1-208ENST00000496116 IGSF21Q96ID5 467 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 BTBD9Q96Q07 612 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 SPAG4Q9NPE6 437 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 GKN1Q9NS71 199 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 SARDHQ9UL12 918 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 DTNAQ9Y4J8 743 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 PCDHGA7Q9Y5G6 932 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 DNAJC15Q9Y5T4 150 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 ATP6AP2A0A1C7CYW4 349 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 BBIP1A8MTZ0 92 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 STX16-NPEPL1H3BU86 382 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 STX7O15400 261 aaKnown RBP11.03□□□□□ -0.64
CMSS1-208ENST00000496116 NRP2O60462 931 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 TSPAN3O60637 253 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 PQBP1O60828 265 aaKnown RBP11.03□□□□□ -0.64
CMSS1-208ENST00000496116 CLASP2O75122 1294 aaKnown RBP11.03□□□□□ -0.64
CMSS1-208ENST00000496116 ATP6AP2O75787 350 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 CDK14O94921 469 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 SIX3O95343 332 aaPredicted RBP11.03□□□□□ -0.64
CMSS1-208ENST00000496116 SEC24AO95486 1093 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 EFEMP2O95967 443 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 LYNP07948 512 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 UBTFL6P0CB48 400 aaPredicted RBP11.03□□□□□ -0.64
CMSS1-208ENST00000496116 PRSS56P0CW18 603 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 PAX7P23759 505 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 MC4RP32245 332 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 SGSHP51688 502 aa11.03□□□□□ -0.64
CMSS1-208ENST00000496116 LCP2Q13094 533 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms