RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 TRIM17Q9Y577 477 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 CPQQ9Y646 472 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 INPP4BO15327 924 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 FCGR1AP12314 374 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 TCF3P15923 654 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 GMPSP49915 693 aaPredicted RBP15.34■□□□□ 0.05
SDF4-207ENST00000494748 FOXM1Q08050 763 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 SPCS2Q15005 226 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 NEPROQ6NW34 567 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 SLC22A9Q8IVM8 553 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 SLC22A17Q8WUG5 538 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 MRGPRX2Q96LB1 330 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 COLEC11Q9BWP8 271 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 MROQ9BYG7 248 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 GLOD4Q9HC38 313 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 PCDHGA11Q9Y5H2 935 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 A0A1B0GTL3 188 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 PIP5K1BO14986 540 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 JRKO75564 520 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 FGF4P08620 206 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 RBP1P09455 135 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 MAP4P27816 1152 aaKnown RBP15.34■□□□□ 0.05
SDF4-207ENST00000494748 STX1BP61266 288 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 TIAL1Q01085 375 aaKnown RBP eCLIP15.34■□□□□ 0.05
SDF4-207ENST00000494748 ITGADQ13349 1161 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 KIF19Q2TAC6 998 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 SPATS1Q496A3 300 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 COQ5Q5HYK3 327 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 KANK2Q63ZY3 851 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 RANBP10Q6VN20 620 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 BPIFB6Q8NFQ5 453 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 ABHD11Q8NFV4 315 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 ALG9Q9H6U8 611 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 LRRC14BA6NHZ5 514 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 RECQL4O94761 1208 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 BCL10O95999 233 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 PLA2G16P53816 162 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 CDH13P55290 713 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 HERVK_113P63132 956 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 ZNF33AQ06730 810 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 TUBA3CQ13748 450 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 DPY19L1Q2PZI1 675 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 KIAA0408Q6ZU52 694 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 KIAA2013Q8IYS2 634 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 MIER2Q8N344 545 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 APPL2Q8NEU8 664 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 RAB2BQ8WUD1 216 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 KCNA7Q96RP8 456 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 ERVK-6Q9BXR3 956 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 ALG2Q9H553 416 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 DSEQ9UL01 958 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 SLC27A5Q9Y2P5 690 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 ANKRD12Q6UB98 2062 aa15.34■□□□□ 0.05
SDF4-207ENST00000494748 SUPT7LO94864 414 aa15.33■□□□□ 0.05
SDF4-207ENST00000494748 PRSS23O95084 383 aa15.33■□□□□ 0.05
SDF4-207ENST00000494748 ESRRBO95718 433 aa15.33■□□□□ 0.05
SDF4-207ENST00000494748 ZNF286BP0CG31 522 aa15.33■□□□□ 0.05
SDF4-207ENST00000494748 WARSP23381 471 aaKnown RBP15.33■□□□□ 0.05
SDF4-207ENST00000494748 AKAP5P24588 427 aa15.33■□□□□ 0.05
SDF4-207ENST00000494748 MAP3K7CLP57077 242 aa15.33■□□□□ 0.05
SDF4-207ENST00000494748 IFITM3Q01628 133 aa15.33■□□□□ 0.05
SDF4-207ENST00000494748 HECTD2Q5U5R9 776 aa15.33■□□□□ 0.05
SDF4-207ENST00000494748 DCP1BQ8IZD4 617 aaKnown RBP15.33■□□□□ 0.05
SDF4-207ENST00000494748 CLYBLQ8N0X4 340 aa15.33■□□□□ 0.05
SDF4-207ENST00000494748 ZMIZ2Q8NF64 920 aa15.33■□□□□ 0.05
SDF4-207ENST00000494748 GID8Q9NWU2 228 aa15.33■□□□□ 0.05
SDF4-207ENST00000494748 PKD2L2Q9NZM6 624 aa15.33■□□□□ 0.05
SDF4-207ENST00000494748 GPR45Q9Y5Y3 372 aa15.33■□□□□ 0.05
SDF4-207ENST00000494748 C1orf232A0A0U1RR37 186 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 MAFKO60675 156 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 KPNA6O60684 536 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 CRHBPP24387 322 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 CXCR3P49682 368 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 PAGE3Q5JUK9 113 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 PIM3Q86V86 326 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 TWIST2Q8WVJ9 160 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 SH3YL1Q96HL8 342 aaPredicted RBP15.33■□□□□ 0.04
SDF4-207ENST00000494748 C16orf70Q9BSU1 422 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 TRIM54Q9BYV2 358 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 PDGFDQ9GZP0 370 aaPredicted RBP15.33■□□□□ 0.04
SDF4-207ENST00000494748 TXNRD2Q9NNW7 524 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 DDIT4Q9NX09 232 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 GMIPQ9P107 970 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 POLG2Q9UHN1 485 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 AQP9O43315 295 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 ABCB7O75027 752 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 RPS12P25398 132 aaKnown RBP15.33■□□□□ 0.04
SDF4-207ENST00000494748 CLCN5P51795 746 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 SLC12A2P55011 1212 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 POLD3Q15054 466 aaPredicted RBP15.33■□□□□ 0.04
SDF4-207ENST00000494748 GPR158Q5T848 1215 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 LAIR2Q6ISS4 152 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 SLC27A1Q6PCB7 646 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 TBC1D21Q8IYX1 336 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 OR13J1Q8NGT2 312 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 TAMM41Q96BW9 452 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 TKTL2Q9H0I9 626 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 ATXN3LQ9H3M9 355 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 AKIP1Q9NQ31 210 aa15.33■□□□□ 0.04
SDF4-207ENST00000494748 SLAMF8Q9P0V8 285 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms