RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 UBA7P41226 1012 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 GARSP41250 739 aaKnown RBP2.78□□□□□ -1.96
LRIF1-203ENST00000494675 PRCPP42785 496 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 COMPP49747 757 aaPredicted RBP2.78□□□□□ -1.96
LRIF1-203ENST00000494675 SNX16P57768 344 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 ZBED6P86452 979 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 CRYZQ08257 329 aaKnown RBP2.78□□□□□ -1.96
LRIF1-203ENST00000494675 LRMPQ12912 555 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 TRAF2Q12933 501 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 IKQ13123 557 aaPredicted RBP2.78□□□□□ -1.96
LRIF1-203ENST00000494675 AIMP2Q13155 320 aaKnown RBP2.78□□□□□ -1.96
LRIF1-203ENST00000494675 PLCB4Q15147 1175 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 EFNB3Q15768 340 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 DUSP28Q4G0W2 176 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 PPP6R3Q5H9R7 873 aaPredicted RBP2.78□□□□□ -1.96
LRIF1-203ENST00000494675 JADE1Q6IE81 842 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 SEPT14Q6ZU15 432 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 CACNA2D4Q7Z3S7 1137 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 SZRD1Q7Z422 152 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.78□□□□□ -1.96
LRIF1-203ENST00000494675 RNF168Q8IYW5 571 aaPredicted RBP2.78□□□□□ -1.96
LRIF1-203ENST00000494675 SAMD14Q8IZD0 417 aaPredicted RBP2.78□□□□□ -1.96
LRIF1-203ENST00000494675 NSUN4Q96CB9 384 aaKnown RBP2.78□□□□□ -1.96
LRIF1-203ENST00000494675 SAT2Q96F10 170 aaPredicted RBP2.78□□□□□ -1.96
LRIF1-203ENST00000494675 CALML4Q96GE6 196 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 PGAM5Q96HS1 289 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 ACOX2Q99424 681 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 SEPT5Q99719 369 aaPredicted RBP2.78□□□□□ -1.96
LRIF1-203ENST00000494675 SETD4Q9NVD3 440 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 CWC15Q9P013 229 aaKnown RBP2.78□□□□□ -1.96
LRIF1-203ENST00000494675 SLC9A2Q9UBY0 812 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 FBXL17Q9UF56 701 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 AGO1Q9UL18 857 aaKnown RBP2.78□□□□□ -1.96
LRIF1-203ENST00000494675 TMEM5Q9Y2B1 443 aa2.78□□□□□ -1.96
LRIF1-203ENST00000494675 AGAP14A8MT82 685 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 GPC4O75487 556 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 GLUD1P00367 558 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 SRPRAP08240 638 aaKnown RBP2.78□□□□□ -1.97
LRIF1-203ENST00000494675 PORP16435 677 aaPredicted RBP2.78□□□□□ -1.97
LRIF1-203ENST00000494675 ACTN2P35609 894 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 GLUD2P49448 558 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 CAMPP49913 170 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 TAS2R40P59535 323 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 ACSM2AQ08AH3 577 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 ACVR2BQ13705 512 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 TOMM20Q15388 145 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 HLFQ16534 295 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 CTF1Q16619 201 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 EFHC1Q5JVL4 640 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 PLEKHS1Q5SXH7 462 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 ACSM2BQ68CK6 577 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 KIAA0930Q6ICG6 404 aaPredicted RBP2.78□□□□□ -1.97
LRIF1-203ENST00000494675 BRINP3Q76B58 766 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 DPPA4Q7L190 304 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 FBXL14Q8N1E6 418 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 TMTC2Q8N394 836 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 RND1Q92730 232 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 MOAP1Q96BY2 351 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 MTBPQ96DY7 904 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 RSRC1Q96IZ7 334 aaKnown RBP2.78□□□□□ -1.97
LRIF1-203ENST00000494675 PPP1R13BQ96KQ4 1090 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 KCNN2Q9H2S1 579 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 PLK3Q9H4B4 646 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 C17orf75Q9HAS0 396 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 ACSS1Q9NUB1 689 aaPredicted RBP2.78□□□□□ -1.97
LRIF1-203ENST00000494675 OGFRQ9NZT2 677 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 NENFQ9UMX5 172 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 PCDHGB4Q9UN71 923 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 PCDHA7Q9UN72 937 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 RABGAP1Q9Y3P9 1069 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 SNX9Q9Y5X1 595 aa2.78□□□□□ -1.97
LRIF1-203ENST00000494675 A0A1W2PQ09 198 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 B4DLN1 442 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 ATP2A1O14983 1001 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 NDUFS7O75251 213 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 EGFP01133 1207 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 GABRB1P18505 474 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 BDKRB2P30411 391 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 HOXC9P31274 260 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 MRPL12P52815 198 aaKnown RBP2.77□□□□□ -1.97
LRIF1-203ENST00000494675 MFAP4P55083 255 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 MRPS34P82930 218 aaKnown RBP2.77□□□□□ -1.97
LRIF1-203ENST00000494675 DDR1Q08345 913 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 EPS8Q12929 822 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 GRIK2Q13002 908 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 CDC16Q13042 620 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 IRF3Q14653 427 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 PNLIPRP3Q17RR3 467 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 ASTE1Q2TB18 679 aaPredicted RBP2.77□□□□□ -1.97
LRIF1-203ENST00000494675 AMZ1Q400G9 498 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 LRIF1Q5T3J3 769 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 CFAP58Q5T655 872 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 DUS1LQ6P1R4 473 aaKnown RBP2.77□□□□□ -1.97
LRIF1-203ENST00000494675 C8orf82Q6P1X6 216 aaPredicted RBP2.77□□□□□ -1.97
LRIF1-203ENST00000494675 DLK2Q6UY11 383 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 C9orf47Q6ZRZ4 202 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 NEXN-AS1Q8NBZ9 246 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 OR8K5Q8NH50 307 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 FAM216AQ8WUB2 273 aa2.77□□□□□ -1.97
LRIF1-203ENST00000494675 JAKMIP2Q96AA8 810 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms