RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 HMGCLL1Q8TB92 370 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 NEK9Q8TD19 979 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 RRNAD1Q96FB5 475 aaKnown RBP4.49□□□□□ -1.69
SMC4-224ENST00000494612 RSRC1Q96IZ7 334 aaKnown RBP4.49□□□□□ -1.69
SMC4-224ENST00000494612 CSF3RQ99062 836 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 GAD1Q99259 594 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 NCAPGQ9BPX3 1015 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 NUDT16L1Q9BRJ7 211 aaKnown RBP4.49□□□□□ -1.69
SMC4-224ENST00000494612 PCGF1Q9BSM1 259 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 PPP1R3EQ9H7J1 279 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 NOX4Q9NPH5 578 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 CNGB3Q9NQW8 809 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 SETD4Q9NVD3 440 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 STON1Q9Y6Q2 735 aa4.49□□□□□ -1.69
SMC4-224ENST00000494612 SMARCA2P51531 1590 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 AGAP14A8MT82 685 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 K7ENM7 598 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 NDUFS3O75489 264 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 FTCDO95954 541 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 T-ENOLP0DO92 83 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 ITGB8P26012 769 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 C21orf33P30042 268 aaPredicted RBP4.48□□□□□ -1.69
SMC4-224ENST00000494612 CDC25AP30304 524 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 ARRB2P32121 409 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 ACSL1P33121 698 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 MXI1P50539 228 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 METAP2P50579 478 aaKnown RBP eCLIP4.48□□□□□ -1.69
SMC4-224ENST00000494612 ROR2Q01974 943 aaKnown RBP4.48□□□□□ -1.69
SMC4-224ENST00000494612 IKQ13123 557 aaPredicted RBP4.48□□□□□ -1.69
SMC4-224ENST00000494612 EFNB3Q15768 340 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 C6orf141Q5SZD1 244 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 CFAP58Q5T655 872 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 SIGIRRQ6IA17 410 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 C16orf54Q6UWD8 224 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 SLC36A4Q6YBV0 504 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 PQLC2Q6ZP29 291 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 ENOSF1Q7L5Y1 443 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 TAGAPQ8N103 731 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 AADATQ8N5Z0 425 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 OR8K5Q8NH50 307 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 OR14A16Q8NHC5 309 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 HARBI1Q96MB7 349 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 KXD1Q9BQD3 176 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 SF3B5Q9BWJ5 86 aaKnown RBP4.48□□□□□ -1.69
SMC4-224ENST00000494612 MAK16Q9BXY0 300 aaKnown RBP4.48□□□□□ -1.69
SMC4-224ENST00000494612 DCLK3Q9C098 648 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 CCDC68Q9H2F9 335 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 PLK3Q9H4B4 646 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 PDZD7Q9H5P4 517 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 HIF1ANQ9NWT6 349 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 IL36RNQ9UBH0 155 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 FBXL17Q9UF56 701 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 RPS6KA6Q9UK32 745 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 SNX9Q9Y5X1 595 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 SESN1Q9Y6P5 492 aa4.48□□□□□ -1.69
SMC4-224ENST00000494612 LINC01553A4QN01 128 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 A8MV72 311 aaPredicted RBP4.47□□□□□ -1.69
SMC4-224ENST00000494612 SLC28A2O43868 658 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 HS6ST1O60243 411 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 CH25HO95992 272 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 EGFP01133 1207 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 CSH1P0DML2 217 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 CSH2P0DML3 217 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 GABRB1P18505 474 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 CDH2P19022 906 aaPredicted RBP4.47□□□□□ -1.69
SMC4-224ENST00000494612 CHATP28329 748 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 SSTR2P30874 369 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 HOXD3P31249 432 aaPredicted RBP4.47□□□□□ -1.69
SMC4-224ENST00000494612 HNRNPH1P31943 449 aaKnown RBP4.47□□□□□ -1.69
SMC4-224ENST00000494612 CAMPP49913 170 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 ST3GAL1Q11201 340 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 ASTE1Q2TB18 679 aaPredicted RBP4.47□□□□□ -1.69
SMC4-224ENST00000494612 WDR73Q6P4I2 378 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 SARM1Q6SZW1 724 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 ADGRF2Q8IZF7 708 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 CCDC89Q8N998 374 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 C1orf131Q8NDD1 294 aaKnown RBP4.47□□□□□ -1.69
SMC4-224ENST00000494612 SAT2Q96F10 170 aaPredicted RBP4.47□□□□□ -1.69
SMC4-224ENST00000494612 ACOX2Q99424 681 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 HAUS8Q9BT25 410 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 SLCO5A1Q9H2Y9 848 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 TTC7AQ9ULT0 858 aaPredicted RBP4.47□□□□□ -1.69
SMC4-224ENST00000494612 MYO6Q9UM54 1294 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 RABGAP1Q9Y3P9 1069 aa4.47□□□□□ -1.69
SMC4-224ENST00000494612 HMGXB3Q12766 1538 aa4.46□□□□□ -1.69
SMC4-224ENST00000494612 ATAD2BQ9ULI0 1458 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 IGHV4-28A0A0C4DH34 117 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 B4DLN1 442 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 ATP2A1O14983 1001 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 FIBPO43427 364 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 JRKO75564 520 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 SERPINI2O75830 405 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 TSPAN9O75954 239 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 BEST1O76090 585 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 TPPPO94811 219 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 SOX30O94993 753 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 STARD3NLO95772 234 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 TUBBP07437 444 aa4.46□□□□□ -1.7
SMC4-224ENST00000494612 ANXA7P20073 488 aaKnown RBP4.46□□□□□ -1.7
SMC4-224ENST00000494612 STX2P32856 288 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms