RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 OR56B2PQ8NGI1 322 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 OR52K1Q8NGK4 314 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 OR6Y1Q8NGX8 325 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 RFWD2Q8NHY2 731 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 FIBINQ8TAL6 211 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 RNF139Q8WU17 664 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 SLC22A17Q8WUG5 538 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 SLC5A11Q8WWX8 675 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 CELF1Q92879 486 aaKnown RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 TRIM43Q96BQ3 446 aaPredicted RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 RMDN1Q96DB5 314 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 PHF21BQ96EK2 531 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 SIPA1Q96FS4 1042 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 ZDHHC12Q96GR4 267 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 PDLIM5Q96HC4 596 aaKnown RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 EPSTI1Q96J88 318 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 SNX22Q96L94 193 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 REEP2Q9BRK0 252 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 UTP14AQ9BVJ6 771 aaKnown RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 TEX12Q9BXU0 123 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 ACPTQ9BZG2 426 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 TM6SF1Q9BZW5 370 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 NYXQ9GZU5 481 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 HSD3B7Q9H2F3 369 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 PABPC3Q9H361 631 aaKnown RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 ABHD16BQ9H3Z7 469 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 TAF1DQ9H5J8 278 aaPredicted RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 DNAJC18Q9H819 358 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 ZNF556Q9HAH1 456 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 BRF2Q9HAW0 419 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 CRLF2Q9HC73 371 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 MOV10Q9HCE1 1003 aaKnown RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 IL1RAPL2Q9NP60 686 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 TRPV5Q9NQA5 729 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 PFDN4Q9NQP4 134 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 PRDM8Q9NQV8 689 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 ANO10Q9NW15 660 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 ASNSD1Q9NWL6 643 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 HCFC1R1Q9NWW0 138 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 NMRK1Q9NWW6 199 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 STK32BQ9NY57 414 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 AATFQ9NY61 560 aaKnown RBP eCLIP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 PSD3Q9NYI0 1048 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 TAS2R10Q9NYW0 307 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 NINJ2Q9NZG7 142 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 CWC15Q9P013 229 aaKnown RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 MRPL15Q9P015 296 aaKnown RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 COL20A1Q9P218 1284 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 MARCH4Q9P2E8 410 aaPredicted RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 CPNE7Q9UBL6 633 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 DNAJB9Q9UBS3 223 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 DKK4Q9UBT3 224 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 FAM153AQ9UHL3 310 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 TEKT2Q9UIF3 430 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 RIMKLBQ9ULI2 386 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 AURKCQ9UQB9 309 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 WDR37Q9Y2I8 494 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 CHTOPQ9Y3Y2 248 aaKnown RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 CLDN16Q9Y5I7 305 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 AKNAQ7Z591 1439 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 SPATA31A5Q5VU36 1347 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 RNF123Q5XPI4 1314 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 SPATA31A7Q8IWB4 1347 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 A0A1B0GUV1 79 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 A4D1N5 150 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 CLEC18AA5D8T8 446 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 OR6C75A6NL08 312 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 H0YGN5 161 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 H0YIV9 168 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 AGPSO00116 658 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 ZNF263O14978 683 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 MAGEB3O15480 346 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 RNF113AO15541 343 aaKnown RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 SLC25A17O43808 307 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 NMT2O60551 498 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 LDB3O75112 727 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 BCAS2O75934 225 aaPredicted RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 KRT38O76015 456 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 GCNT3O95395 438 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 YEATS4O95619 227 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 F9P00740 461 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 MT-ND5P03915 603 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 TPOP07202 933 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 MYBL1P10243 752 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 UBL4AP11441 157 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 CPA1P15085 419 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 NPPBP16860 134 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 RXRAP19793 462 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 MMP8P22894 467 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 ACVR2AP27037 513 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 GABRB3P28472 473 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 RBL1P28749 1068 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 NTSR1P30989 418 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 GDI1P31150 447 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 HOXC8P31273 242 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 IL15P40933 162 aaPredicted RBP2.27□□□□□ -2.05
PTPN12-212ENST00000494248 EPS15P42566 896 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 CASP3P42574 277 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 PAFAH1B1P43034 410 aa2.27□□□□□ -2.05
PTPN12-212ENST00000494248 MAGEA8P43361 318 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms