RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 THPOP40225 353 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 ALCAMQ13740 583 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 LAMB3Q13751 1172 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 NEDD9Q14511 834 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 DUSP6Q16828 381 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 METTL2BQ6P1Q9 378 aaKnown RBP6.22□□□□□ -1.41
SMC2-205ENST00000493955 CCDC186Q7Z3E2 898 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 CACNA2D4Q7Z3S7 1137 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 PALB2Q86YC2 1186 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 ARRDC2Q8TBH0 407 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 TMEM174Q8WUU8 243 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 ATP6V1E2Q96A05 226 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 METTL2AQ96IZ6 378 aaKnown RBP6.22□□□□□ -1.41
SMC2-205ENST00000493955 EGLN2Q96KS0 407 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 RSPH9Q9H1X1 276 aaPredicted RBP6.22□□□□□ -1.41
SMC2-205ENST00000493955 PIGMQ9H3S5 423 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 DENND2DQ9H6A0 471 aaPredicted RBP6.22□□□□□ -1.41
SMC2-205ENST00000493955 AMACRQ9UHK6 382 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 ZNF148Q9UQR1 794 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 E5RJQ4 531 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 ZC3H11AO75152 810 aaKnown RBP eCLIP6.21□□□□□ -1.42
SMC2-205ENST00000493955 CYC1P08574 325 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 CCDC175P0C221 793 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 UBA1P22314 1058 aaKnown RBP6.21□□□□□ -1.42
SMC2-205ENST00000493955 METAP2P50579 478 aaKnown RBP eCLIP6.21□□□□□ -1.42
SMC2-205ENST00000493955 TMF1P82094 1093 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 ST3GAL1Q11201 340 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 TFCP2Q12800 502 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 IL11RAQ14626 422 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 CRY2Q49AN0 593 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 KRBOX4Q5JUW0 171 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 DAB2IPQ5VWQ8 1189 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 GGNBP1Q5YKI7 109 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 SIGIRRQ6IA17 410 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 CHST3Q7LGC8 479 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 THNSL1Q8IYQ7 743 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 GUF1Q8N442 669 aaKnown RBP6.21□□□□□ -1.42
SMC2-205ENST00000493955 SPATA6LQ8N4H0 392 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 Q8NFD4 153 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 ENGASEQ8NFI3 743 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 PTERQ96BW5 349 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 QTRT1Q9BXR0 403 aaKnown RBP6.21□□□□□ -1.42
SMC2-205ENST00000493955 POLDIP3Q9BY77 421 aaKnown RBP6.21□□□□□ -1.42
SMC2-205ENST00000493955 ANKRD2Q9GZV1 360 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 RIOX1Q9H6W3 641 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 PPP1R3EQ9H7J1 279 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 EPB41L5Q9HCM4 733 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 ADARB2Q9NS39 739 aaKnown RBP6.21□□□□□ -1.42
SMC2-205ENST00000493955 UBA2Q9UBT2 640 aaPredicted RBP6.21□□□□□ -1.42
SMC2-205ENST00000493955 ANAPC5Q9UJX4 755 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 RCOR1Q9UKL0 485 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 PCDHA12Q9UN75 941 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 COG5Q9UP83 839 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 RAI2Q9Y5P3 530 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 ABCC9O60706 1549 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 ARHGEF40Q8TER5 1519 aa6.21□□□□□ -1.42
SMC2-205ENST00000493955 KANSL1LA0AUZ9 987 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 URADA6NGE7 173 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 ADAM10O14672 748 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 MAP2K7O14733 419 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 PLRG1O43660 514 aaKnown RBP6.2□□□□□ -1.42
SMC2-205ENST00000493955 DDX5P17844 614 aaKnown RBP6.2□□□□□ -1.42
SMC2-205ENST00000493955 MAOAP21397 527 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 GDF5P43026 501 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 MSH2P43246 934 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 RAD23BP54727 409 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 SREBF2Q12772 1141 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 GRSF1Q12849 480 aaKnown RBP eCLIP6.2□□□□□ -1.42
SMC2-205ENST00000493955 MTX1Q13505 466 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 COG2Q14746 738 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 DLG2Q15700 870 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 ZNF805Q5CZA5 627 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 Q5PR19 223 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 SLC18B1Q6NT16 456 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 SLC16A12Q6ZSM3 486 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 TAOK1Q7L7X3 1001 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 RD3Q7Z3Z2 195 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 SDCCAG8Q86SQ7 713 aaPredicted RBP6.2□□□□□ -1.42
SMC2-205ENST00000493955 LPGAT1Q92604 370 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 RTN4RQ9BZR6 473 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 TMEM51Q9NW97 253 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 SELENONQ9NZV5 590 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 DNAJB4Q9UDY4 337 aa6.2□□□□□ -1.42
SMC2-205ENST00000493955 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.2□□□□□ -1.42
SMC2-205ENST00000493955 SRPRBQ9Y5M8 271 aaKnown RBP6.2□□□□□ -1.42
SMC2-205ENST00000493955 KDM4EB2RXH2 506 aaPredicted RBP6.19□□□□□ -1.42
SMC2-205ENST00000493955 SMAD9O15198 467 aaKnown RBP6.19□□□□□ -1.42
SMC2-205ENST00000493955 ICAM1P05362 532 aa6.19□□□□□ -1.42
SMC2-205ENST00000493955 VDRP11473 427 aa6.19□□□□□ -1.42
SMC2-205ENST00000493955 CYP19A1P11511 503 aaPredicted RBP6.19□□□□□ -1.42
SMC2-205ENST00000493955 PIGAP37287 484 aa6.19□□□□□ -1.42
SMC2-205ENST00000493955 MMP14P50281 582 aa6.19□□□□□ -1.42
SMC2-205ENST00000493955 ARSEP51690 589 aa6.19□□□□□ -1.42
SMC2-205ENST00000493955 SELENOVP59797 346 aa6.19□□□□□ -1.42
SMC2-205ENST00000493955 ADORA2A-AS1P86434 159 aa6.19□□□□□ -1.42
SMC2-205ENST00000493955 ZXDAP98168 799 aa6.19□□□□□ -1.42
SMC2-205ENST00000493955 PPARDQ03181 441 aa6.19□□□□□ -1.42
SMC2-205ENST00000493955 SUPT20HL1Q3ZLR7 823 aa6.19□□□□□ -1.42
SMC2-205ENST00000493955 PARM1Q6UWI2 310 aa6.19□□□□□ -1.42
SMC2-205ENST00000493955 YTHDF3Q7Z739 585 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms