RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 TAF8Q7Z7C8 310 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 B3GNT8Q7Z7M8 397 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 VSIG1Q86XK7 387 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 FSTL5Q8N475 847 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-212ENST00000493940 GPBAR1Q8TDU6 330 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 CCDC74AQ96AQ1 378 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 IMP4Q96G21 291 aaKnown RBP12.57□□□□□ -0.4
HSPG2-212ENST00000493940 ATXN7L3BQ96GX2 97 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 BBC3Q96PG8 261 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-212ENST00000493940 RIOK2Q9BVS4 552 aaKnown RBP12.57□□□□□ -0.4
HSPG2-212ENST00000493940 USP29Q9HBJ7 922 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 LCMT1Q9UIC8 334 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 SUFUQ9UMX1 484 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 EPN1Q9Y6I3 576 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-212ENST00000493940 ZNF106Q9H2Y7 1883 aaKnown RBP12.57□□□□□ -0.4
HSPG2-212ENST00000493940 hCG_1818297A0A087WSY0 165 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 A0A087WV48 116 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 GOLGA6CA6NDK9 693 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 GOLGA6BA6NDN3 693 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 AURKAO14965 403 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 INPP4BO15327 924 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 SPOPO43791 374 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 CST8O60676 142 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 EML2O95834 649 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 FGF1P05230 155 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 GOLGA6DP0CG33 693 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 PTPN3P26045 913 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 SLC1A1P43005 524 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 ARHGEF7Q14155 803 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 PRKD1Q15139 912 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-212ENST00000493940 NOMO1Q15155 1222 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 ZNF648Q5T619 568 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-212ENST00000493940 DOK6Q6PKX4 331 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 GKN2Q86XP6 184 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 SDR16C5Q8N3Y7 309 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 ARL10Q8N8L6 244 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 ACRBPQ8NEB7 543 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 FAM46DQ8NEK8 389 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 HAUS1Q96CS2 278 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 AP2M1Q96CW1 435 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 SCARF2Q96GP6 870 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-212ENST00000493940 MRFAP1L1Q96HT8 127 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 COX14Q96I36 57 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 DCBLD2Q96PD2 775 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 PANX2Q96RD6 677 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 LYSMD1Q96S90 227 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 MAK16Q9BXY0 300 aaKnown RBP12.56□□□□□ -0.4
HSPG2-212ENST00000493940 ABCG4Q9H172 646 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 CARS2Q9HA77 564 aaKnown RBP12.56□□□□□ -0.4
HSPG2-212ENST00000493940 DDX56Q9NY93 547 aaKnown RBP12.56□□□□□ -0.4
HSPG2-212ENST00000493940 GOLGA6AQ9NYA3 693 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 UBP1Q9NZI7 540 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 SEPT10Q9P0V9 454 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 DOLKQ9UPQ8 538 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 SLC17A4Q9Y2C5 497 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 PRKAB1Q9Y478 270 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 RNF215Q9Y6U7 377 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 PIKFYVEQ9Y2I7 2098 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 SDK2Q58EX2 2172 aa12.56□□□□□ -0.4
HSPG2-212ENST00000493940 B4DGG1 531 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 F5H423 210 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-212ENST00000493940 B4GAT1O43505 415 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 NDUFA10O95299 355 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 ATP1A1P05023 1023 aaKnown RBP12.55□□□□□ -0.4
HSPG2-212ENST00000493940 CES1P23141 567 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 CA5AP35218 305 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 ADCY8P40145 1251 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 GPR1P46091 355 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 GNPDA1P46926 289 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 SPINT3P49223 89 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 EPHB1P54762 984 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 MAZP56270 477 aaKnown RBP12.55□□□□□ -0.4
HSPG2-212ENST00000493940 CTBSQ01459 385 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 HLTFQ14527 1009 aaKnown RBP eCLIP12.55□□□□□ -0.4
HSPG2-212ENST00000493940 PDK1Q15118 436 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 PCSK7Q16549 785 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 TEX44Q53QW1 395 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 ADAMTSL4Q6UY14 1074 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 MARK2Q7KZI7 788 aaKnown RBP12.55□□□□□ -0.4
HSPG2-212ENST00000493940 LYSMD3Q7Z3D4 306 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 C17orf82Q86X59 251 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-212ENST00000493940 CCDC170Q8IYT3 715 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 KATNAL2Q8IYT4 538 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 Q8N9G6 341 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-212ENST00000493940 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-212ENST00000493940 NXPE2Q96DL1 559 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 TEKT5Q96M29 485 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 DEPDC7Q96QD5 511 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 HEMGNQ9BXL5 484 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 GLOD4Q9HC38 313 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 ARFGAP3Q9NP61 516 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 ASCL3Q9NQ33 180 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 PHPT1Q9NRX4 125 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-212ENST00000493940 TRIM10Q9UDY6 481 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 ATXN7L1Q9ULK2 861 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-212ENST00000493940 SATB2Q9UPW6 733 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 SHOC2Q9UQ13 582 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 SPO11Q9Y5K1 396 aa12.55□□□□□ -0.4
HSPG2-212ENST00000493940 SETXQ7Z333 2677 aaKnown RBP12.55□□□□□ -0.4
HSPG2-212ENST00000493940 A0A0A6YYK5 440 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms