RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 CLDN14O95500 239 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 PMS2P2O95744 297 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 HNRNPA1P09651 372 aaKnown RBP eCLIP3.76□□□□□ -1.81
CD46-217ENST00000493796 AGAP20933 346 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 MT3P25713 68 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 PPM1FP49593 454 aaPredicted RBP3.76□□□□□ -1.81
CD46-217ENST00000493796 TRPC3Q13507 836 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 CAMK1Q14012 370 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 NEDD9Q14511 834 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 ZNF718Q3SXZ3 478 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 AMZ1Q400G9 498 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 ZNF672Q499Z4 452 aaPredicted RBP3.76□□□□□ -1.81
CD46-217ENST00000493796 TXNDC8Q6A555 127 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 ZNF354CQ86Y25 554 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 RFLNBQ8N5W9 214 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 SCCPDHQ8NBX0 429 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 AGBL3Q8NEM8 1001 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 CREB3L4Q8TEY5 395 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 DNASE2BQ8WZ79 361 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 IL17FQ96PD4 163 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 BBS4Q96RK4 519 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 CSF3RQ99062 836 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 NOX4Q9NPH5 578 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 SMARCAL1Q9NZC9 954 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 TBX20Q9UMR3 447 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 SNX9Q9Y5X1 595 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 KIF20BQ96Q89 1820 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 PHRF1Q9P1Y6 1649 aaKnown RBP3.76□□□□□ -1.81
CD46-217ENST00000493796 LTN1O94822 1766 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 A0A1W2PP64 1363 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 POLR3AO14802 1390 aaPredicted RBP3.76□□□□□ -1.81
CD46-217ENST00000493796 ANKRD26Q9UPS8 1709 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 ATXN2Q99700 1313 aaKnown RBP3.75□□□□□ -1.81
CD46-217ENST00000493796 SHPRHQ149N8 1683 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 AHDC1Q5TGY3 1603 aaPredicted RBP3.75□□□□□ -1.81
CD46-217ENST00000493796 RRN3P2A6NIE6 340 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 TAF4O00268 1085 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 TULP2O00295 520 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 TNPO2O14787 897 aaKnown RBP3.75□□□□□ -1.81
CD46-217ENST00000493796 BCAT2O15382 392 aaPredicted RBP3.75□□□□□ -1.81
CD46-217ENST00000493796 NCAM2O15394 837 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 HOXC11O43248 304 aaPredicted RBP3.75□□□□□ -1.81
CD46-217ENST00000493796 BUB3O43684 328 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 KRT86O43790 486 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 KRT36O76013 467 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 KDM4BO94953 1096 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 MT-CYBP00156 380 aaPredicted RBP3.75□□□□□ -1.81
CD46-217ENST00000493796 MMP2P08253 660 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 COX7A2P14406 83 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 STX2P32856 288 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 GGT5P36269 586 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 DLX5P56178 289 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 BRWD1-AS2P59051 145 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 UFM1P61960 85 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 GALNT2Q10471 571 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 HYAL1Q12794 435 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 DDX10Q13206 875 aaKnown RBP3.75□□□□□ -1.81
CD46-217ENST00000493796 KRT81Q14533 505 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 RNPS1Q15287 305 aaKnown RBP3.75□□□□□ -1.81
CD46-217ENST00000493796 OASLQ15646 514 aaKnown RBP3.75□□□□□ -1.81
CD46-217ENST00000493796 ZRSR1Q15695 479 aaKnown RBP3.75□□□□□ -1.81
CD46-217ENST00000493796 ZRSR2Q15696 482 aaKnown RBP3.75□□□□□ -1.81
CD46-217ENST00000493796 HIST2H2ACQ16777 129 aaPredicted RBP3.75□□□□□ -1.81
CD46-217ENST00000493796 TCTN1Q2MV58 587 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 MMEL1Q495T6 779 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 ATP13A5Q4VNC0 1218 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 SGO1Q5FBB7 561 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 PAPPA-AS1Q5QFB9 102 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 CPLX2Q6PUV4 134 aaKnown RBP3.75□□□□□ -1.81
CD46-217ENST00000493796 B3GNT6Q6ZMB0 384 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 MTSS1LQ765P7 747 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 RRM2BQ7LG56 351 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 DHX40Q8IX18 779 aaKnown RBP3.75□□□□□ -1.81
CD46-217ENST00000493796 CPXCR1Q8N123 301 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 BEST2Q8NFU1 509 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 MYRIPQ8NFW9 859 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 APOPT1Q96IL0 206 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 ZNF570Q96NI8 536 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 VPS33BQ9H267 617 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 PANK3Q9H999 370 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 MAGEE1Q9HCI5 957 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 PPP1R14DQ9NXH3 145 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 SAGE1Q9NXZ1 904 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 FAM96BQ9Y3D0 163 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 PPIP5K1Q6PFW1 1433 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 SHANK3Q9BYB0 1731 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 NFAT5O94916 1531 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 LMO7Q8WWI1 1683 aa3.75□□□□□ -1.81
CD46-217ENST00000493796 BRWD3Q6RI45 1802 aa3.74□□□□□ -1.81
CD46-217ENST00000493796 COL22A1Q8NFW1 1626 aaPredicted RBP3.74□□□□□ -1.81
CD46-217ENST00000493796 A0A087WYN8 130 aa3.74□□□□□ -1.81
CD46-217ENST00000493796 TEX13CA0A0J9YWL9 993 aa3.74□□□□□ -1.81
CD46-217ENST00000493796 PRAC2D3DTV9 90 aa3.74□□□□□ -1.81
CD46-217ENST00000493796 CLGNO14967 610 aa3.74□□□□□ -1.81
CD46-217ENST00000493796 TFP02787 698 aa3.74□□□□□ -1.81
CD46-217ENST00000493796 F7P08709 466 aaPredicted RBP3.74□□□□□ -1.81
CD46-217ENST00000493796 LINC00271P0C7V0 271 aa3.74□□□□□ -1.81
CD46-217ENST00000493796 SHMT1P34896 483 aa3.74□□□□□ -1.81
CD46-217ENST00000493796 MAPK9P45984 424 aa3.74□□□□□ -1.81
CD46-217ENST00000493796 RPP30P78346 268 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms