RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 RARSP54136 660 aaKnown RBP4.22□□□□□ -1.73
ITGB1-216ENST00000493758 PITX1P78337 314 aaPredicted RBP4.22□□□□□ -1.73
ITGB1-216ENST00000493758 DECR1Q16698 335 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 SYT16Q17RD7 645 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 COL28A1Q2UY09 1125 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 ACCSLQ4AC99 568 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 JAKMIP3Q5VZ66 844 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 C9orf139Q6ZV77 190 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 GSTA5Q7RTV2 222 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 R3HCC1LQ7Z5L2 792 aaKnown RBP4.22□□□□□ -1.73
ITGB1-216ENST00000493758 NR2C2APQ86WQ0 139 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 TMEM219Q86XT9 240 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 POC1AQ8NBT0 407 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 ETNPPLQ8TBG4 499 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 SGCDQ92629 289 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 RND1Q92730 232 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 INTS12Q96CB8 462 aaKnown RBP4.22□□□□□ -1.73
ITGB1-216ENST00000493758 TMEM68Q96MH6 324 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 EIF2AK1Q9BQI3 630 aaKnown RBP4.22□□□□□ -1.73
ITGB1-216ENST00000493758 NDST4Q9H3R1 872 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 MKLN1Q9UL63 735 aa4.22□□□□□ -1.73
ITGB1-216ENST00000493758 DOCK7Q96N67 2140 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 A0A0G2JPF8 293 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 HNRNPCL3B7ZW38 293 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 F5H0A9 414 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-216ENST00000493758 VCYO14598 125 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 HNRNPCL1O60812 293 aaKnown RBP4.21□□□□□ -1.74
ITGB1-216ENST00000493758 DAB1O75553 588 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 HNRNPCL4P0DMR1 293 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 CDH2P19022 906 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-216ENST00000493758 CD53P19397 219 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 UBA1P22314 1058 aaKnown RBP4.21□□□□□ -1.74
ITGB1-216ENST00000493758 TMPOP42166 694 aaKnown RBP4.21□□□□□ -1.74
ITGB1-216ENST00000493758 NLRP5P59047 1200 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 RELQ04864 619 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-216ENST00000493758 ATF7IPQ6VMQ6 1270 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 DIS3L2Q8IYB7 885 aaKnown RBP4.21□□□□□ -1.74
ITGB1-216ENST00000493758 TMEM116Q8NCL8 245 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 DNASE2BQ8WZ79 361 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 ABTB1Q969K4 478 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-216ENST00000493758 ARHGEF26Q96DR7 871 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 MMABQ96EY8 250 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-216ENST00000493758 RRNAD1Q96FB5 475 aaKnown RBP4.21□□□□□ -1.74
ITGB1-216ENST00000493758 TTC14Q96N46 770 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 MAGIXQ9H6Y5 334 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 KIF9Q9HAQ2 790 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 DLGAP2Q9P1A6 1054 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 DLGAP4Q9Y2H0 992 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 PSAT1Q9Y617 370 aa4.21□□□□□ -1.74
ITGB1-216ENST00000493758 TDRD9Q8NDG6 1382 aaKnown RBP4.2□□□□□ -1.74
ITGB1-216ENST00000493758 A0A087WYN8 130 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 A0A0B4J293 547 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 FAM237AA0A1B0GTK4 181 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 J3KRW8 73 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 SPINT2O43291 252 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 HCRTR2O43614 444 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 RTN3O95197 1032 aaPredicted RBP4.2□□□□□ -1.74
ITGB1-216ENST00000493758 IPO7O95373 1038 aaKnown RBP4.2□□□□□ -1.74
ITGB1-216ENST00000493758 UMODP07911 640 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 ATP1A3P13637 1013 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 FUT6P51993 359 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 MPP1Q00013 466 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 FOXM1Q08050 763 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 SLC20A2Q08357 652 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 HYAL1Q12794 435 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 ZNF234Q14588 700 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 ADIPOQQ15848 244 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 CDONQ4KMG0 1287 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 SIGIRRQ6IA17 410 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 LCN10Q6JVE6 187 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 ZNF280DQ6N043 979 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 RGMBQ6NW40 437 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 RNF113BQ8IZP6 322 aaKnown RBP4.2□□□□□ -1.74
ITGB1-216ENST00000493758 BEST3Q8N1M1 668 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 SPATA20Q8TB22 786 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 IGSF8Q969P0 613 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 HARBI1Q96MB7 349 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 MMP28Q9H239 520 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 FKRPQ9H9S5 495 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 FBRSL1Q9HCM7 1045 aaKnown RBP4.2□□□□□ -1.74
ITGB1-216ENST00000493758 ACSS1Q9NUB1 689 aaPredicted RBP4.2□□□□□ -1.74
ITGB1-216ENST00000493758 DONSONQ9NYP3 566 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 LOXL2Q9Y4K0 774 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 PCDHAC2Q9Y5I4 1007 aa4.2□□□□□ -1.74
ITGB1-216ENST00000493758 ARID4BQ4LE39 1312 aaPredicted RBP4.2□□□□□ -1.74
ITGB1-216ENST00000493758 FAM172BPA6NC97 362 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 EIF3CLB5ME19 914 aaKnown RBP4.19□□□□□ -1.74
ITGB1-216ENST00000493758 IGKV3-20P01619 116 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 IGLV2-11P01706 119 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 KRT9P35527 623 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 DDIT3P35638 169 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 RGS2P41220 211 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 TAS2R38P59533 333 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 ARL16Q0P5N6 197 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 TMEM115Q12893 351 aaPredicted RBP4.19□□□□□ -1.74
ITGB1-216ENST00000493758 GAGE5Q13069 117 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 GAGE6Q13070 117 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 TSTQ16762 297 aaKnown RBP4.19□□□□□ -1.74
ITGB1-216ENST00000493758 KRTAP24-1Q3LI83 254 aa4.19□□□□□ -1.74
ITGB1-216ENST00000493758 CCDC70Q6NSX1 233 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms